RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 TTC19Q6DKK2 380 aaPredicted RBP18.04■□□□□ 0.48
PHRF1-201ENST00000264555 RFX6Q8HWS3 928 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 CCHCR1Q8TD31 782 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 FAM167AQ96KS9 214 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 FMO2Q99518 471 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 H7C0C1 242 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 KRT1P04264 644 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 ATP5OP48047 213 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 GPC5P78333 572 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 ST3GAL1Q11201 340 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 ANKRD20A3Q5VUR7 823 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 RSRC1Q96IZ7 334 aaKnown RBP18.04■□□□□ 0.48
PHRF1-201ENST00000264555 INTS2Q9H0H0 1204 aaKnown RBP18.04■□□□□ 0.48
PHRF1-201ENST00000264555 INTS9Q9NV88 658 aaKnown RBP18.04■□□□□ 0.48
PHRF1-201ENST00000264555 PALM3A6NDB9 673 aaPredicted RBP18.04■□□□□ 0.48
PHRF1-201ENST00000264555 SRGAP2CP0DJJ0 459 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 HSPA1LP34931 641 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 BSPRYQ5W0U4 402 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 CAPN12Q6ZSI9 719 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 SESTD1Q86VW0 696 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 SCINQ9Y6U3 715 aa18.04■□□□□ 0.48
PHRF1-201ENST00000264555 A6NJR5 290 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 GOLGA8SH3BPF8 625 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 FXR1P51114 621 aaKnown RBP eCLIP18.03■□□□□ 0.48
PHRF1-201ENST00000264555 DENND3A2RUS2 1198 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 UBE2Q2LH0YL09 131 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 CCT5P48643 541 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 EIF3BP55884 814 aaKnown RBP18.03■□□□□ 0.48
PHRF1-201ENST00000264555 DRAP1Q14919 205 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-201ENST00000264555 MCUR1Q96AQ8 359 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 PPP1R3GB7ZBB8 358 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 PPP2R5DQ14738 602 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 SLC16A3O15427 465 aaKnown RBP18.03■□□□□ 0.48
PHRF1-201ENST00000264555 CD58P19256 250 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 RASSF2P50749 326 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 APOBEC3FQ8IUX4 373 aaKnown RBP18.03■□□□□ 0.48
PHRF1-201ENST00000264555 GRID2IPA4D2P6 1211 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 TOB1P50616 345 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-201ENST00000264555 ARHGAP24Q8N264 748 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 CHP1Q99653 195 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 RGL1Q9NZL6 768 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 HDAC6Q9UBN7 1215 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 ZNRF3Q9ULT6 936 aa18.03■□□□□ 0.48
PHRF1-201ENST00000264555 MRPS9P82933 396 aaKnown RBP18.02■□□□□ 0.48
PHRF1-201ENST00000264555 RPF1Q9H9Y2 349 aaKnown RBP18.02■□□□□ 0.48
PHRF1-201ENST00000264555 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.02■□□□□ 0.48
PHRF1-201ENST00000264555 SYNGAP1Q96PV0 1343 aa18.02■□□□□ 0.48
PHRF1-201ENST00000264555 RPUSD2Q8IZ73 545 aaKnown RBP18.02■□□□□ 0.48
PHRF1-201ENST00000264555 NPHP3-ACAD11A0A0J9YXS1 232 aa18.02■□□□□ 0.48
PHRF1-201ENST00000264555 NEDD9Q14511 834 aa18.02■□□□□ 0.48
PHRF1-201ENST00000264555 NFRKBQ6P4R8 1299 aa18.02■□□□□ 0.48
PHRF1-201ENST00000264555 NLRP7Q8WX94 980 aa18.02■□□□□ 0.48
PHRF1-201ENST00000264555 GABBR1Q9UBS5 961 aa18.02■□□□□ 0.48
PHRF1-201ENST00000264555 PODXLO00592 558 aa18.02■□□□□ 0.47
PHRF1-201ENST00000264555 HIP1RO75146 1068 aa18.02■□□□□ 0.47
PHRF1-201ENST00000264555 TADA3O75528 432 aa18.02■□□□□ 0.47
PHRF1-201ENST00000264555 RNF169Q8NCN4 708 aa18.02■□□□□ 0.47
PHRF1-201ENST00000264555 ODF2LQ9ULJ1 636 aa18.02■□□□□ 0.47
PHRF1-201ENST00000264555 ADGRA1Q86SQ6 560 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 CLDN3O15551 220 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 ATP1A1P05023 1023 aaKnown RBP18.01■□□□□ 0.47
PHRF1-201ENST00000264555 OSTNP61366 133 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 VPS52Q8N1B4 723 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 CNOT10Q9H9A5 744 aaKnown RBP18.01■□□□□ 0.47
PHRF1-201ENST00000264555 HAUS2Q9NVX0 235 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 CAPN7Q9Y6W3 813 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 LLGL1Q15334 1064 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 APOL6Q9BWW8 343 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 PRR12Q9ULL5 1215 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 TTLL3Q9Y4R7 772 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 RGL2O15211 777 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 MYO1EQ12965 1108 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 TNS2Q63HR2 1409 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 SWSAP1Q6NVH7 229 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 PHLDB2Q86SQ0 1253 aa18.01■□□□□ 0.47
PHRF1-201ENST00000264555 CNOT8Q9UFF9 292 aaKnown RBP18.01■□□□□ 0.47
PHRF1-201ENST00000264555 MARK3P27448 753 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 KRT39Q6A163 491 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 STYK1Q6J9G0 422 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 TBC1D31Q96DN5 1066 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 FAM213AQ9BRX8 229 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 ANKRD26Q9UPS8 1709 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 HMGB1P1B2RPK0 211 aaPredicted RBP18■□□□□ 0.47
PHRF1-201ENST00000264555 AFAP1L2Q8N4X5 818 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 TAB3Q8N5C8 712 aaPredicted RBP18■□□□□ 0.47
PHRF1-201ENST00000264555 LPAR1Q92633 364 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 NLRP4Q96MN2 994 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 ACAD9Q9H845 621 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 ZNF302Q9NR11 478 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 EDRF1Q3B7T1 1238 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 FAM151AQ8WW52 585 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 MTRQ99707 1265 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 PCDHA10Q9Y5I2 948 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 CD2APQ9Y5K6 639 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 MYO5BQ9ULV0 1848 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 SSU72P8A0A1W2PR75 194 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 MRPS25P82663 173 aaKnown RBP18■□□□□ 0.47
PHRF1-201ENST00000264555 HDLBPQ00341 1268 aaKnown RBP18■□□□□ 0.47
PHRF1-201ENST00000264555 HAUS6Q7Z4H7 955 aa18■□□□□ 0.47
PHRF1-201ENST00000264555 KCTD17Q8N5Z5 321 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms