RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PCDHA12Q9UN75 941 aa17.55■□□□□ 0.4
GPC1-201ENST00000264039 FYB2Q5VWT5 728 aa17.55■□□□□ 0.4
GPC1-201ENST00000264039 CCDC137Q6PK04 289 aaKnown RBP17.55■□□□□ 0.4
GPC1-201ENST00000264039 ARHGEF18Q6ZSZ5 1173 aa17.55■□□□□ 0.4
GPC1-201ENST00000264039 PIDD1Q9HB75 910 aa17.55■□□□□ 0.4
GPC1-201ENST00000264039 KBTBD4Q9NVX7 518 aa17.55■□□□□ 0.4
GPC1-201ENST00000264039 TBX22Q9Y458 520 aa17.55■□□□□ 0.4
GPC1-201ENST00000264039 NVLO15381 856 aaKnown RBP17.55■□□□□ 0.4
GPC1-201ENST00000264039 IFNB1P01574 187 aa17.55■□□□□ 0.4
GPC1-201ENST00000264039 ALX1Q15699 326 aa17.55■□□□□ 0.4
GPC1-201ENST00000264039 DBN1Q16643 649 aa17.55■□□□□ 0.4
GPC1-201ENST00000264039 SNRNP27Q8WVK2 155 aaKnown RBP17.55■□□□□ 0.4
GPC1-201ENST00000264039 USTQ9Y2C2 406 aa17.55■□□□□ 0.4
GPC1-201ENST00000264039 NR2E1Q9Y466 385 aa17.55■□□□□ 0.4
GPC1-201ENST00000264039 ATXN2Q99700 1313 aaKnown RBP17.54■□□□□ 0.4
GPC1-201ENST00000264039 KLRC4O43908 158 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 SNX3O60493 162 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 CBX6O95503 412 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 CREB1P16220 341 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 EPHB2P29323 1055 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 MAPKAPK5Q8IW41 473 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 MREGQ8N565 214 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 CNBD1Q8NA66 436 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 DDX27Q96GQ7 796 aaKnown RBP17.54■□□□□ 0.4
GPC1-201ENST00000264039 LRRC4CQ9HCJ2 640 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 SIK3Q9Y2K2 1263 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 SUGT1Q9Y2Z0 365 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 ANKRD26Q9UPS8 1709 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 TDP2O95551 362 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 MYL1P05976 194 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 MRPS35P82673 323 aaKnown RBP17.54■□□□□ 0.4
GPC1-201ENST00000264039 COG7P83436 770 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 PDCD2Q16342 344 aaPredicted RBP17.54■□□□□ 0.4
GPC1-201ENST00000264039 CCDC152Q4G0S7 254 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 CCDC62Q6P9F0 684 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 PIGOQ8TEQ8 1089 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 PURBQ96QR8 312 aaKnown RBP17.54■□□□□ 0.4
GPC1-201ENST00000264039 TMEM165Q9HC07 324 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 STOML1Q9UBI4 398 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 PASKQ96RG2 1323 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 CHMP2AO43633 222 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 ITIH4Q14624 930 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 CROCCP2Q86T23 111 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 GGA2Q9UJY4 613 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 NAGPAQ9UK23 515 aa17.54■□□□□ 0.4
GPC1-201ENST00000264039 CORO1CQ9ULV4 474 aaPredicted RBP17.54■□□□□ 0.4
GPC1-201ENST00000264039 NIP7Q9Y221 180 aaKnown RBP eCLIP17.54■□□□□ 0.4
GPC1-201ENST00000264039 RTCBQ9Y3I0 505 aaKnown RBP17.54■□□□□ 0.4
GPC1-201ENST00000264039 HECW2Q9P2P5 1572 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 MAP3K15Q6ZN16 1313 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 CNTNAP5Q8WYK1 1306 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 ARHGAP42A6NI28 874 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 MAPK13O15264 365 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 AGTP01019 485 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 CPA2P48052 419 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 ZNF571Q7Z3V5 609 aaPredicted RBP17.53■□□□□ 0.4
GPC1-201ENST00000264039 C4orf33Q8N1A6 199 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 GUF1Q8N442 669 aaKnown RBP17.53■□□□□ 0.4
GPC1-201ENST00000264039 PIGSQ96S52 555 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 TTYH3Q9C0H2 523 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 CCSER1Q9C0I3 900 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 PARP2Q9UGN5 583 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 PCDHA6Q9UN73 950 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 PCDHA8Q9Y5H6 950 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 PXDNQ92626 1479 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 GSTA1P08263 222 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 ZNF513Q8N8E2 541 aaPredicted RBP17.53■□□□□ 0.4
GPC1-201ENST00000264039 SLC35G2Q8TBE7 412 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 IFT172Q9UG01 1749 aa17.53■□□□□ 0.4
GPC1-201ENST00000264039 GYG2O15488 501 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 AFPP02771 609 aaKnown RBP17.52■□□□□ 0.4
GPC1-201ENST00000264039 RPS6KA3P51812 740 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 COASYQ13057 564 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 UBE2SQ16763 222 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 MDH1BQ5I0G3 518 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 RBM26Q5T8P6 1007 aaKnown RBP17.52■□□□□ 0.4
GPC1-201ENST00000264039 CRELD2Q6UXH1 353 aaPredicted RBP17.52■□□□□ 0.4
GPC1-201ENST00000264039 TPCN2Q8NHX9 752 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 MIPOL1Q8TD10 442 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 FBXO41Q8TF61 875 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 RUNDC3BQ96NL0 473 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 HEMGNQ9BXL5 484 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 RIC8AQ9NPQ8 531 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 ETS2P15036 469 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 CTNNA2P26232 953 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 CDK17Q00537 523 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 CDR2Q01850 454 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 ADAM22Q9P0K1 906 aa17.52■□□□□ 0.4
GPC1-201ENST00000264039 MAP3K7O43318 606 aa17.52■□□□□ 0.39
GPC1-201ENST00000264039 UCHL3P15374 230 aa17.52■□□□□ 0.39
GPC1-201ENST00000264039 CETN2P41208 172 aa17.52■□□□□ 0.39
GPC1-201ENST00000264039 RCN1Q15293 331 aa17.52■□□□□ 0.39
GPC1-201ENST00000264039 FIGNQ5HY92 759 aa17.52■□□□□ 0.39
GPC1-201ENST00000264039 EPM2AIP1Q7L775 607 aaPredicted RBP17.52■□□□□ 0.39
GPC1-201ENST00000264039 NLRP10Q86W26 655 aa17.52■□□□□ 0.39
GPC1-201ENST00000264039 ZMYND8Q9ULU4 1186 aaPredicted RBP17.52■□□□□ 0.39
GPC1-201ENST00000264039 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.52■□□□□ 0.39
GPC1-201ENST00000264039 TSPOAP1O95153 1857 aa17.52■□□□□ 0.39
GPC1-201ENST00000264039 SMNDC1O75940 238 aaKnown RBP eCLIP17.51■□□□□ 0.39
GPC1-201ENST00000264039 GH1P01241 217 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms