RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 TNPO2O14787 897 aaKnown RBP25.28■■□□□ 1.64
SMARCB1-201ENST00000263121 DGAT1O75907 488 aa25.28■■□□□ 1.64
SMARCB1-201ENST00000263121 PRPF6O94906 941 aaKnown RBP25.28■■□□□ 1.64
SMARCB1-201ENST00000263121 MAPTP10636 758 aaKnown RBP25.28■■□□□ 1.64
SMARCB1-201ENST00000263121 PLS3P13797 630 aa25.28■■□□□ 1.64
SMARCB1-201ENST00000263121 CTGFP29279 349 aa25.28■■□□□ 1.64
SMARCB1-201ENST00000263121 RGS2P41220 211 aa25.28■■□□□ 1.64
SMARCB1-201ENST00000263121 KNOP1Q1ED39 458 aaKnown RBP25.28■■□□□ 1.64
SMARCB1-201ENST00000263121 LRRC55Q6ZSA7 311 aa25.28■■□□□ 1.64
SMARCB1-201ENST00000263121 STRA6Q9BX79 667 aa25.28■■□□□ 1.64
SMARCB1-201ENST00000263121 AZI2Q9H6S1 392 aa25.28■■□□□ 1.64
SMARCB1-201ENST00000263121 TPM3P06753 285 aa25.27■■□□□ 1.64
SMARCB1-201ENST00000263121 PTGS1P23219 599 aa25.27■■□□□ 1.64
SMARCB1-201ENST00000263121 NR1I3Q14994 352 aa25.27■■□□□ 1.64
SMARCB1-201ENST00000263121 PPP4R3CPQ6ZMV5 832 aa25.27■■□□□ 1.64
SMARCB1-201ENST00000263121 PLPPR4Q7Z2D5 763 aa25.27■■□□□ 1.64
SMARCB1-201ENST00000263121 FAM114A1Q8IWE2 563 aa25.27■■□□□ 1.64
SMARCB1-201ENST00000263121 ANKRD20A12PQ8NF67 263 aa25.27■■□□□ 1.64
SMARCB1-201ENST00000263121 CEP89Q96ST8 783 aa25.27■■□□□ 1.64
SMARCB1-201ENST00000263121 GPRC5CQ9NQ84 441 aa25.27■■□□□ 1.64
SMARCB1-201ENST00000263121 FLRT1Q9NZU1 646 aa25.27■■□□□ 1.64
SMARCB1-201ENST00000263121 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 PPP1R37O75864 691 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 IGHA2P01877 340 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 YY1P25490 414 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 MTERF2Q49AM1 385 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 GJC2Q5T442 439 aaPredicted RBP25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 OLFML2BQ68BL8 750 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 ZC3H3Q8IXZ2 948 aaKnown RBP25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 MCPH1Q8NEM0 835 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 FAM167AQ96KS9 214 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 APBA2Q99767 749 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 XPNPEP1Q9NQW7 623 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 NRBP2Q9NSY0 501 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 TRAF3IP3Q9Y228 551 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 FGFR1OPO95684 399 aaKnown RBP25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 COPB1P53618 953 aaKnown RBP25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 TARBP2Q15633 366 aaKnown RBP25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 EDRF1Q3B7T1 1238 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 DUSP28Q4G0W2 176 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 FAM102BQ5T8I3 360 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 IQSEC1Q6DN90 963 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 STXBP4Q6ZWJ1 553 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 KIFAP3Q92845 792 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 CNOT6LQ96LI5 555 aaKnown RBP25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 ATP6V0A4Q9HBG4 840 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 RTN4Q9NQC3 1192 aaKnown RBP25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 MAGEC2Q9UBF1 373 aaPredicted RBP25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 NRBP1Q9UHY1 535 aa25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 ZHX1Q9UKY1 873 aaPredicted RBP25.26■■□□□ 1.63
SMARCB1-201ENST00000263121 PDXKO00764 312 aa25.25■■□□□ 1.63
SMARCB1-201ENST00000263121 SMPD1P17405 629 aa25.25■■□□□ 1.63
SMARCB1-201ENST00000263121 FKBP3Q00688 224 aaKnown RBP25.25■■□□□ 1.63
SMARCB1-201ENST00000263121 CCDC144BQ3MJ40 725 aa25.25■■□□□ 1.63
SMARCB1-201ENST00000263121 ZC2HC1CQ53FD0 456 aaPredicted RBP25.25■■□□□ 1.63
SMARCB1-201ENST00000263121 VSTM4Q8IW00 320 aa25.25■■□□□ 1.63
SMARCB1-201ENST00000263121 PPTC7Q8NI37 304 aa25.25■■□□□ 1.63
SMARCB1-201ENST00000263121 GLG1Q92896 1179 aa25.25■■□□□ 1.63
SMARCB1-201ENST00000263121 EEF2KMTQ96G04 330 aa25.25■■□□□ 1.63
SMARCB1-201ENST00000263121 ZMYM2Q9UBW7 1377 aa25.25■■□□□ 1.63
SMARCB1-201ENST00000263121 NKRFO15226 690 aaKnown RBP eCLIP25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 CYP2B6P20813 491 aa25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 SLC26A2P50443 739 aa25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 KCNA1Q09470 495 aa25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 ALCAMQ13740 583 aa25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 CCL14Q16627 93 aa25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 TRIM50Q86XT4 487 aa25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 ST6GALNAC4Q9H4F1 302 aa25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 DHX33Q9H6R0 707 aaKnown RBP25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 C17orf75Q9HAS0 396 aa25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 TYW1Q9NV66 732 aaKnown RBP25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 TAB2Q9NYJ8 693 aa25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 IMPACTQ9P2X3 320 aa25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 PPME1Q9Y570 386 aa25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 PCDHB13Q9Y5F0 798 aa25.24■■□□□ 1.63
SMARCB1-201ENST00000263121 ZSWIM8A7E2V4 1837 aa25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 RTP1P59025 263 aa25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 FILIP1LQ4L180 1135 aa25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 TMC6Q7Z403 805 aa25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 BBXQ8WY36 941 aaPredicted RBP25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 CEP63Q96MT8 703 aa25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 SMARCAD1Q9H4L7 1026 aa25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 K7ENM7 598 aa25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 NCKAP1LP55160 1127 aa25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 FCGRTP55899 365 aa25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 LACTBP83111 547 aaPredicted RBP25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 EMC2Q15006 297 aa25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 CCDC186Q7Z3E2 898 aa25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 ATP8B4Q8TF62 1192 aa25.23■■□□□ 1.63
SMARCB1-201ENST00000263121 TEX33O43247 280 aa25.22■■□□□ 1.63
SMARCB1-201ENST00000263121 TGFB1I1O43294 461 aa25.22■■□□□ 1.63
SMARCB1-201ENST00000263121 ZNF865P0CJ78 1059 aaPredicted RBP25.22■■□□□ 1.63
SMARCB1-201ENST00000263121 RFC5P40937 340 aa25.22■■□□□ 1.63
SMARCB1-201ENST00000263121 POLGP54098 1239 aaPredicted RBP25.22■■□□□ 1.63
SMARCB1-201ENST00000263121 PEX3P56589 373 aa25.22■■□□□ 1.63
SMARCB1-201ENST00000263121 PLCB4Q15147 1175 aa25.22■■□□□ 1.63
SMARCB1-201ENST00000263121 SLC17A8Q8NDX2 589 aa25.22■■□□□ 1.63
SMARCB1-201ENST00000263121 AFG1LQ8WV93 481 aa25.22■■□□□ 1.63
SMARCB1-201ENST00000263121 VPS16Q9H269 839 aa25.22■■□□□ 1.63
SMARCB1-201ENST00000263121 N4BP3O15049 544 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms