RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 POP1Q99575 1024 aaKnown RBP17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 ANKIB1Q9P2G1 1089 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 SLIT1O75093 1534 aa17.19■□□□□ 0.34
PRPF40B-201ENST00000261897 UCHL3P15374 230 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 ADCY8P40145 1251 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 RBM26Q5T8P6 1007 aaKnown RBP17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 CD302Q8IX05 232 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 SLC35G2Q8TBE7 412 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 PIDD1Q9HB75 910 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 ETAA1Q9NY74 926 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 FBXO3Q9UK99 471 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 MON2Q7Z3U7 1717 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 SETD1AO15047 1707 aaKnown RBP17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 SPDYE5A6NIY4 337 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 STXBP3O00186 592 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 ALDH3A1P30838 453 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 NBPF20Q3BBV1 942 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 C3orf20Q8ND61 904 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 RUBCNQ92622 972 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 PWWP2AQ96N64 755 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 DDX50Q9BQ39 737 aaKnown RBP17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 PPP1R9AQ9ULJ8 1098 aa17.18■□□□□ 0.34
PRPF40B-201ENST00000261897 ENTPD5O75356 428 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 RNF220Q5VTB9 566 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 CCDC137Q6PK04 289 aaKnown RBP17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 PPFIBP2Q8ND30 876 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 RAB3IPQ96QF0 476 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 ERP44Q9BS26 406 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 DCP1AQ9NPI6 582 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 MTUS1Q9ULD2 1270 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 ZMYND8Q9ULU4 1186 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 MYH15Q9Y2K3 1946 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 PPFIA2O75334 1257 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 CSF1RP07333 972 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 EEF2P13639 858 aaKnown RBP17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 ATP4AP20648 1035 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 PLCB3Q01970 1234 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 MECOMQ03112 1051 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 CFAP157Q5JU67 520 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 KIAA0825Q8IV33 1275 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 MREGQ8N565 214 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 P3H4Q92791 437 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 NAP1L3Q99457 506 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 HEMGNQ9BXL5 484 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 PABPC3Q9H361 631 aaKnown RBP17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 KIF3CO14782 793 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 PIAS1O75925 651 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 CBX6O95503 412 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 CDK17Q00537 523 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 USP4Q13107 963 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 SUSD4Q5VX71 490 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 TNFRSF25Q93038 417 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 IQCDQ96DY2 449 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 BTBD6Q96KE9 485 aa17.17■□□□□ 0.34
PRPF40B-201ENST00000261897 SLC37A4O43826 429 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 DLATP10515 647 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 SERPINB4P48594 390 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 RBM5P52756 815 aaKnown RBP eCLIP17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 ADCY2Q08462 1091 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 ZRSR2Q15696 482 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 MIS18BP1Q6P0N0 1132 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 C7orf25Q9BPX7 421 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 LAMA4Q16363 1823 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 TRIM49P0CI25 452 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 TRIM49CP0CI26 452 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 GRB10Q13322 594 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 LAMB3Q13751 1172 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 FIGNQ5HY92 759 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 HHATQ5VTY9 493 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 UBL4BQ8N7F7 174 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 RNF25Q96BH1 459 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 ERVK-5Q9HDB9 667 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 USTQ9Y2C2 406 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 C2CD2Q9Y426 696 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 A0A0G2JND7 137 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 POTEFA5A3E0 1075 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 AFPP02771 609 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 POTEIP0CG38 1075 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 POTEGQ6S5H5 508 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 POTEEQ6S8J3 1075 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 C4orf33Q8N1A6 199 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 SH3RF3Q8TEJ3 882 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 LRRC37BQ96QE4 947 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 NT5C3AQ9H0P0 336 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 IKZF4Q9H2S9 585 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 VPS37BQ9H9H4 285 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 PKD2L1Q9P0L9 805 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 SLAIN2Q9P270 581 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 SCOCQ9UIL1 159 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 ARL2BPQ9Y2Y0 163 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 TSPOAP1O95153 1857 aa17.16■□□□□ 0.34
PRPF40B-201ENST00000261897 MYL1P05976 194 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 EPHB2P29323 1055 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 LRRC23Q53EV4 343 aaPredicted RBP17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 LRRC8CQ8TDW0 803 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 ELMO3Q96BJ8 720 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 TECPR2O15040 1411 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 RASA4BC9J798 803 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 RASA4O43374 803 aa17.15■□□□□ 0.34
PRPF40B-201ENST00000261897 SNX3O60493 162 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms