RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 KCTD10Q9H3F6 313 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 GCNT4Q9P109 453 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 FAM198AQ9UFP1 575 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 PCDHGC5Q9Y5F6 944 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 KDM3AQ9Y4C1 1321 aa15.78■□□□□ 0.12
SFSWAP-201ENST00000261674 TTI1O43156 1089 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 H2AFZP0C0S5 128 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 HSD17B3P37058 310 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 ARHGAP44Q17R89 818 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 H2AFVQ71UI9 128 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 PSMD1Q99460 953 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 CNOT7Q9UIV1 285 aaKnown RBP15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 FBXL5Q9UKA1 691 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 NOC2LQ9Y3T9 749 aaKnown RBP15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 TBCAO75347 108 aaKnown RBP15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 FLOT1O75955 427 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 PON1P27169 355 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 SMARCA1P28370 1054 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 ORC2Q13416 577 aaPredicted RBP15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 SH3BP5LQ7L8J4 393 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 IRF2BP2Q7Z5L9 587 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 VPS36Q86VN1 386 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 SPICE1Q8N0Z3 855 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 WHAMMQ8TF30 809 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 GANQ9H2C0 597 aa15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 NOVA2Q9UNW9 492 aaKnown RBP15.77■□□□□ 0.12
SFSWAP-201ENST00000261674 UBXN2AP68543 259 aa15.77■□□□□ 0.11
SFSWAP-201ENST00000261674 KNOP1Q1ED39 458 aaKnown RBP15.77■□□□□ 0.11
SFSWAP-201ENST00000261674 KRT71Q3SY84 523 aa15.77■□□□□ 0.11
SFSWAP-201ENST00000261674 MAEAQ7L5Y9 396 aa15.77■□□□□ 0.11
SFSWAP-201ENST00000261674 RBM46Q8TBY0 533 aaKnown RBP15.77■□□□□ 0.11
SFSWAP-201ENST00000261674 ZNF473Q8WTR7 871 aaKnown RBP15.77■□□□□ 0.11
SFSWAP-201ENST00000261674 NEUROG2Q9H2A3 272 aa15.77■□□□□ 0.11
SFSWAP-201ENST00000261674 OSGEPQ9NPF4 335 aa15.77■□□□□ 0.11
SFSWAP-201ENST00000261674 AIPL1Q9NZN9 384 aa15.77■□□□□ 0.11
SFSWAP-201ENST00000261674 AJAP1Q9UKB5 411 aaPredicted RBP15.77■□□□□ 0.11
SFSWAP-201ENST00000261674 RBAK-RBAKDNI3L0D1 243 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 PGRMC1O00264 195 aaKnown RBP15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 EPB41P11171 864 aaKnown RBP15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 MDH1P40925 334 aaKnown RBP15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 ZNF211Q13398 564 aaPredicted RBP15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 GLYCTKQ8IVS8 523 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 SYN2Q92777 582 aaPredicted RBP15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 CHORDC1Q9UHD1 332 aaPredicted RBP15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 CCDC88AQ3V6T2 1871 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 TMEM110-MUSTN1A8MSY1 372 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 hCG_1984214I3L0E3 225 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 ZBTB39O15060 712 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 HLA-DOAP06340 250 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 SKOR1P84550 965 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 ARHGAP4P98171 946 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 DHX9Q08211 1270 aaKnown RBP15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 MMS22LQ6ZRQ5 1243 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 NLRP14Q86W24 1093 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 ZNF713Q8N859 430 aaPredicted RBP15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 EPN3Q9H201 632 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 ATP8A1Q9Y2Q0 1164 aa15.76■□□□□ 0.11
SFSWAP-201ENST00000261674 SPDYE3A6NKU9 549 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 WNT10BO00744 389 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 FGGP02679 453 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 HNRNPH1P31943 449 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 CYP2J2P51589 502 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 USP11P51784 963 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 CTTNQ14247 550 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 SEPT2Q15019 361 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 ZC2HC1CQ53FD0 456 aaPredicted RBP15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 TPH2Q8IWU9 490 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 MYCT1Q8N699 235 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 TRIM51Q9BSJ1 452 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 GCFC2P16383 781 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 USP8P40818 1118 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 GIT2Q14161 759 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 PTGISQ16647 500 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 IFI16Q16666 785 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 GPATCH4Q5T3I0 446 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 SLFN13Q68D06 897 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 PCDHA2Q9Y5H9 948 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 LRRN2O75325 713 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 NR3C1P04150 777 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 EEF2P13639 858 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 NMT1P30419 496 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 GAKO14976 1311 aa15.75■□□□□ 0.11
SFSWAP-201ENST00000261674 MEFVO15553 781 aaPredicted RBP15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 VIL1P09327 827 aaKnown RBP15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 SHMT1P34896 483 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 NT5C2P49902 561 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 DGKZQ13574 1117 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 KDM7AQ6ZMT4 941 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 TPCN2Q8NHX9 752 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 ERMNQ8TAM6 284 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 MYCBPAPQ8TBZ2 947 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 ZDHHC15Q96MV8 337 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 MYOZ2Q9NPC6 264 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 TMOD2Q9NZR1 351 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 NR2E1Q9Y466 385 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 KIAA1551Q9HCM1 1747 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 ADAMTSL1Q8N6G6 1762 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 DLEC1Q9Y238 1755 aa15.74■□□□□ 0.11
SFSWAP-201ENST00000261674 MYH1P12882 1939 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms