RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 CREG2Q8IUH2 290 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 PAF1Q8N7H5 531 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 CAVIN3Q969G5 261 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 TMEM47Q9BQJ4 181 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 DCP1AQ9NPI6 582 aaPredicted RBP17.45■□□□□ 0.38
SREBF1-201ENST00000261646 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.45■□□□□ 0.38
SREBF1-201ENST00000261646 MIF4GDA9UHW6 222 aaKnown RBP17.45■□□□□ 0.38
SREBF1-201ENST00000261646 MAP7D1Q3KQU3 841 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 ZBTB10Q96DT7 871 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 MTMR8Q96EF0 704 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 DDX27Q96GQ7 796 aaKnown RBP17.45■□□□□ 0.38
SREBF1-201ENST00000261646 KIF9Q9HAQ2 790 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 ATP5HO75947 161 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 FSBPO95073 299 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 TDP2O95551 362 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 AGTP01019 485 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 TNNI1P19237 187 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 GSDMBQ8TAX9 411 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 CFAP57Q96MR6 1250 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 ZBTB12Q9Y330 459 aaPredicted RBP17.45■□□□□ 0.38
SREBF1-201ENST00000261646 C1orf167Q5SNV9 1468 aa17.45■□□□□ 0.38
SREBF1-201ENST00000261646 MYMKA6NI61 221 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 ERVV-1B6SEH8 477 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 SH3BGRP55822 239 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-201ENST00000261646 SLC29A2Q14542 456 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 TTMPQ5BVD1 217 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 ZNF746Q6NUN9 644 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-201ENST00000261646 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-201ENST00000261646 DYDC2Q96IM9 177 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 BARHL2Q9NY43 387 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 EXOC7Q9UPT5 735 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 DIS3Q9Y2L1 958 aaKnown RBP17.44■□□□□ 0.38
SREBF1-201ENST00000261646 CHRNA3P32297 505 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 COPB2P35606 906 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 NSFP46459 744 aaKnown RBP17.44■□□□□ 0.38
SREBF1-201ENST00000261646 TRIM28Q13263 835 aaKnown RBP17.44■□□□□ 0.38
SREBF1-201ENST00000261646 SFR1Q86XK3 245 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 PCDHA6Q9UN73 950 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 PCDHA8Q9Y5H6 950 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 PPP1R12AO14974 1030 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-201ENST00000261646 HSPA9P38646 679 aaKnown RBP17.44■□□□□ 0.38
SREBF1-201ENST00000261646 LONRF1Q17RB8 773 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 ABTB1Q969K4 478 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-201ENST00000261646 C7orf25Q9BPX7 421 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 L3MBTL1Q9Y468 752 aa17.44■□□□□ 0.38
SREBF1-201ENST00000261646 POTEB3A0JP26 581 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 POTECB2RU33 542 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 SKOR1P84550 965 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 DOK7Q18PE1 504 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 EARS2Q5JPH6 523 aaKnown RBP17.43■□□□□ 0.38
SREBF1-201ENST00000261646 POTEBQ6S5H4 581 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 KCTD1Q719H9 257 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 RNF168Q8IYW5 571 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-201ENST00000261646 FUKQ8N0W3 1084 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 FBXL16Q8N461 479 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 HEMGNQ9BXL5 484 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 MINPP1Q9UNW1 487 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 PNPLA7Q6ZV29 1317 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 CD19P15391 556 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 RANBP1P43487 201 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 GALCP54803 685 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 DRAP1Q14919 205 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-201ENST00000261646 HP1BP3Q5SSJ5 553 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-201ENST00000261646 METTL13Q8N6R0 699 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 RFFLQ8WZ73 363 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 GLG1Q92896 1179 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 ZFP69BQ9UJL9 534 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 THRAP3Q9Y2W1 955 aaKnown RBP17.43■□□□□ 0.38
SREBF1-201ENST00000261646 ITSN1Q15811 1721 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 COL15A1P39059 1388 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 STXBP3O00186 592 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 NR3C1P04150 777 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 USP11P51784 963 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 STAMBPL1Q96FJ0 436 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 ANAPC4Q9UJX5 808 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 SPATA31D1Q6ZQQ2 1576 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 CSF1RP07333 972 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 YWHAGP61981 247 aaKnown RBP eCLIP17.43■□□□□ 0.38
SREBF1-201ENST00000261646 CASC4Q6P4E1 433 aa17.43■□□□□ 0.38
SREBF1-201ENST00000261646 SYT2Q8N9I0 419 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-201ENST00000261646 AGLP35573 1532 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 SLC8A3P57103 927 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 PDE1CQ14123 709 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-201ENST00000261646 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.42■□□□□ 0.38
SREBF1-201ENST00000261646 PDXDC2PQ6P474 469 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 RFX8Q6ZV50 586 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 TLR10Q9BXR5 811 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 SGK1O00141 431 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 SPAG7O75391 227 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 INHBAP08476 426 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 SLC9A1P19634 815 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 CASP7P55210 303 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 CDR2Q01850 454 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 PTK2Q05397 1052 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 KLC1Q07866 573 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 ADAM33Q9BZ11 813 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 SAYSD1Q9NPB0 183 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-201ENST00000261646 OVOS2A0A0G2JMS6 1433 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms