RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 HGSNATQ68CP4 663 aa19.44■□□□□ 0.7
SSB-201ENST00000260956 CTU1Q7Z7A3 348 aaKnown RBP19.44■□□□□ 0.7
SSB-201ENST00000260956 NAPGQ99747 312 aaPredicted RBP19.44■□□□□ 0.7
SSB-201ENST00000260956 MXRA8Q9BRK3 442 aa19.44■□□□□ 0.7
SSB-201ENST00000260956 MOV10L1Q9BXT6 1211 aaKnown RBP19.44■□□□□ 0.7
SSB-201ENST00000260956 WDR11Q9BZH6 1224 aa19.44■□□□□ 0.7
SSB-201ENST00000260956 CCPG1Q9ULG6 757 aa19.44■□□□□ 0.7
SSB-201ENST00000260956 TFR2Q9UP52 801 aa19.44■□□□□ 0.7
SSB-201ENST00000260956 COL11A1P12107 1806 aaPredicted RBP19.44■□□□□ 0.7
SSB-201ENST00000260956 A0A0G2JMZ2 1700 aa19.43■□□□□ 0.7
SSB-201ENST00000260956 CTAGE9A4FU28 777 aa19.43■□□□□ 0.7
SSB-201ENST00000260956 PDXKO00764 312 aa19.43■□□□□ 0.7
SSB-201ENST00000260956 KRT83P78385 493 aa19.43■□□□□ 0.7
SSB-201ENST00000260956 RIT2Q99578 217 aa19.43■□□□□ 0.7
SSB-201ENST00000260956 GANQ9H2C0 597 aa19.43■□□□□ 0.7
SSB-201ENST00000260956 GABRQQ9UN88 632 aa19.43■□□□□ 0.7
SSB-201ENST00000260956 RIPK3Q9Y572 518 aa19.43■□□□□ 0.7
SSB-201ENST00000260956 UBIAD1Q9Y5Z9 338 aa19.43■□□□□ 0.7
SSB-201ENST00000260956 DOCK3Q8IZD9 2030 aa19.43■□□□□ 0.7
SSB-201ENST00000260956 LRRC53A6NM62 1247 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 DHX15O43143 795 aaKnown RBP19.42■□□□□ 0.7
SSB-201ENST00000260956 GAS7O60861 476 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 KRT18P05783 430 aaKnown RBP19.42■□□□□ 0.7
SSB-201ENST00000260956 ZSCAN20P17040 1043 aaPredicted RBP19.42■□□□□ 0.7
SSB-201ENST00000260956 GAP43P17677 238 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 CLCN6P51797 869 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
SSB-201ENST00000260956 EPHA7Q15375 998 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 NFIL3Q16649 462 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 TSR1Q2NL82 804 aaKnown RBP19.42■□□□□ 0.7
SSB-201ENST00000260956 SRGAP1Q7Z6B7 1085 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 UBXN4Q92575 508 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 SPATC1LQ9H0A9 340 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 ZNHIT6Q9NWK9 470 aaKnown RBP19.42■□□□□ 0.7
SSB-201ENST00000260956 EIF3DO15371 548 aaKnown RBP eCLIP19.42■□□□□ 0.71e-7■□□□□ 10.5
SSB-201ENST00000260956 TFRCP02786 760 aaKnown RBP19.42■□□□□ 0.7
SSB-201ENST00000260956 VAV2P52735 878 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 CCDC40Q4G0X9 1142 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 GTF3C2Q8WUA4 911 aaPredicted RBP19.42■□□□□ 0.7
SSB-201ENST00000260956 RABGGTAQ92696 567 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 SYN2Q92777 582 aaPredicted RBP19.42■□□□□ 0.7
SSB-201ENST00000260956 BORCS6Q96GS4 357 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 PCMTD1Q96MG8 357 aaPredicted RBP19.42■□□□□ 0.7
SSB-201ENST00000260956 MCOLN1Q9GZU1 580 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 TYW1Q9NV66 732 aaKnown RBP19.42■□□□□ 0.7
SSB-201ENST00000260956 CEP72Q9P209 647 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 FAM184BQ9ULE4 1060 aa19.42■□□□□ 0.7
SSB-201ENST00000260956 ZBTB39O15060 712 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 TGFB1I1O43294 461 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 ZRANB2O95218 330 aaKnown RBP eCLIP19.41■□□□□ 0.7
SSB-201ENST00000260956 PRKCZQ05513 592 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 MAPK7Q13164 816 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 PLS1Q14651 629 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 TRAPPC11Q7Z392 1133 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 FRMD5Q7Z6J6 570 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 SYTL5Q8TDW5 730 aaPredicted RBP19.41■□□□□ 0.7
SSB-201ENST00000260956 PIGOQ8TEQ8 1089 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 JAKMIP2Q96AA8 810 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 ZNF577Q9BSK1 485 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 STRA6Q9BX79 667 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 MMRN2Q9H8L6 949 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 RAVER2Q9HCJ3 691 aaKnown RBP19.41■□□□□ 0.7
SSB-201ENST00000260956 GJD2Q9UKL4 321 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 MYH11P35749 1972 aa19.41■□□□□ 0.7
SSB-201ENST00000260956 UBE4BO95155 1302 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 RBAK-RBAKDNI3L0D1 243 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 IPO5O00410 1097 aaKnown RBP19.4■□□□□ 0.7
SSB-201ENST00000260956 PRPF6O94906 941 aaKnown RBP19.4■□□□□ 0.7
SSB-201ENST00000260956 ERCC3P19447 782 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 NR2F2P24468 414 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 FCGRTP55899 365 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 MRPS9P82933 396 aaKnown RBP19.4■□□□□ 0.7
SSB-201ENST00000260956 ADAM9Q13443 819 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 MUM1L1Q5H9M0 696 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 PAPD7Q5XG87 772 aaKnown RBP19.4■□□□□ 0.7
SSB-201ENST00000260956 PCNX4Q63HM2 1172 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 CPXCR1Q8N123 301 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 SAMD3Q8N6K7 520 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 NEK9Q8TD19 979 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 ZFP91Q96JP5 570 aaPredicted RBP19.4■□□□□ 0.7
SSB-201ENST00000260956 KCND2Q9NZV8 630 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 LCTP09848 1927 aa19.4■□□□□ 0.7
SSB-201ENST00000260956 SSU72P8A0A1W2PR75 194 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 TNPO2O14787 897 aaKnown RBP19.39■□□□□ 0.7
SSB-201ENST00000260956 CETN3O15182 167 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 SLC16A3O15427 465 aaKnown RBP19.39■□□□□ 0.7
SSB-201ENST00000260956 CHMP2AO43633 222 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 PPP1R37O75864 691 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 EIF4A3P38919 411 aaKnown RBP19.39■□□□□ 0.7
SSB-201ENST00000260956 KIF11P52732 1056 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 CYP27A1Q02318 531 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 KCNA1Q09470 495 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 ITGB3BPQ13352 177 aaPredicted RBP19.39■□□□□ 0.7
SSB-201ENST00000260956 KIF22Q14807 665 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 WHAMMP3Q1A5X7 153 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 GPR142Q7Z601 462 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 DAW1Q8N136 415 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 GPR161Q8N6U8 529 aaKnown RBP19.39■□□□□ 0.7
SSB-201ENST00000260956 NEK11Q8NG66 645 aa19.39■□□□□ 0.7
SSB-201ENST00000260956 TEKT3Q9BXF9 490 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms