RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SEPT9Q9UHD8 586 aaPredicted RBP24.62■■□□□ 1.53
SIX3-201ENST00000260653 TTC26A0AVF1 554 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 CLIC2O15247 247 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 PPP1R37O75864 691 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 NR3C1P04150 777 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 PLS3P13797 630 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 STXBP4Q6ZWJ1 553 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 FBXO16Q8IX29 292 aaPredicted RBP24.62■■□□□ 1.53
SIX3-201ENST00000260653 STRA6Q9BX79 667 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 TRPM7Q96QT4 1865 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 UBE4BO95155 1302 aa24.62■■□□□ 1.53
SIX3-201ENST00000260653 PLXNB2O15031 1838 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 RASSF10A6NK89 507 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 ARHGAP6O43182 974 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 GGPS1O95749 300 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 TGFB3P10600 412 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 FAM102BQ5T8I3 360 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 CHADLQ6NUI6 762 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 TRIM59Q8IWR1 403 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 DHX37Q8IY37 1157 aaKnown RBP24.61■■□□□ 1.53
SIX3-201ENST00000260653 DRC1Q96MC2 740 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 C16orf45Q96MC5 204 aaPredicted RBP24.61■■□□□ 1.53
SIX3-201ENST00000260653 TIPINQ9BVW5 301 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 PCDHB13Q9Y5F0 798 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 GCLCP48506 637 aaPredicted RBP24.61■■□□□ 1.53
SIX3-201ENST00000260653 NEDD9Q14511 834 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 ZNF302Q9NR11 478 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 ABHD10Q9NUJ1 306 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 MORF4L1Q9UBU8 362 aa24.61■■□□□ 1.53
SIX3-201ENST00000260653 ATP4AP20648 1035 aa24.6■■□□□ 1.53
SIX3-201ENST00000260653 KCND1Q9NSA2 647 aa24.6■■□□□ 1.53
SIX3-201ENST00000260653 MAFBQ9Y5Q3 323 aaPredicted RBP24.6■■□□□ 1.53
SIX3-201ENST00000260653 ADORA2AP29274 412 aa24.6■■□□□ 1.53
SIX3-201ENST00000260653 KRT9P35527 623 aa24.6■■□□□ 1.53
SIX3-201ENST00000260653 SOX10P56693 466 aa24.6■■□□□ 1.53
SIX3-201ENST00000260653 CCDC155Q8N6L0 562 aa24.6■■□□□ 1.53
SIX3-201ENST00000260653 PCMTD1Q96MG8 357 aaPredicted RBP24.6■■□□□ 1.53
SIX3-201ENST00000260653 TTYH3Q9C0H2 523 aa24.6■■□□□ 1.53
SIX3-201ENST00000260653 GSTTP1A0A1W2PQM5 241 aa24.59■■□□□ 1.53
SIX3-201ENST00000260653 AKAP3O75969 853 aa24.59■■□□□ 1.53
SIX3-201ENST00000260653 TRIM21P19474 475 aaKnown RBP24.59■■□□□ 1.53
SIX3-201ENST00000260653 METTL7BQ6UX53 244 aa24.59■■□□□ 1.53
SIX3-201ENST00000260653 CCDC51Q96ER9 411 aa24.59■■□□□ 1.53
SIX3-201ENST00000260653 PARK7Q99497 189 aaKnown RBP24.59■■□□□ 1.53
SIX3-201ENST00000260653 CYP26B1Q9NR63 512 aa24.59■■□□□ 1.53
SIX3-201ENST00000260653 DDX41Q9UJV9 622 aaKnown RBP24.59■■□□□ 1.53
SIX3-201ENST00000260653 SIK3Q9Y2K2 1263 aa24.59■■□□□ 1.53
SIX3-201ENST00000260653 PLXNA1Q9UIW2 1896 aa24.59■■□□□ 1.53
SIX3-201ENST00000260653 CASP4P49662 377 aa24.59■■□□□ 1.53
SIX3-201ENST00000260653 PEX3P56589 373 aa24.59■■□□□ 1.53
SIX3-201ENST00000260653 XKR3Q5GH77 459 aa24.59■■□□□ 1.53
SIX3-201ENST00000260653 MORC4Q8TE76 937 aa24.59■■□□□ 1.53
SIX3-201ENST00000260653 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.59■■□□□ 1.53
SIX3-201ENST00000260653 IGKV6D-21A0A0A0MT36 114 aa24.58■■□□□ 1.53
SIX3-201ENST00000260653 SOWAHDA6NJG2 315 aa24.58■■□□□ 1.53
SIX3-201ENST00000260653 RPL13P26373 211 aaKnown RBP24.58■■□□□ 1.53
SIX3-201ENST00000260653 PCYT2Q99447 389 aa24.58■■□□□ 1.53
SIX3-201ENST00000260653 GBP3Q9H0R5 595 aa24.58■■□□□ 1.53
SIX3-201ENST00000260653 CAPN11Q9UMQ6 739 aa24.58■■□□□ 1.53
SIX3-201ENST00000260653 MAPTP10636 758 aaKnown RBP24.58■■□□□ 1.52
SIX3-201ENST00000260653 MTF1Q14872 753 aa24.58■■□□□ 1.52
SIX3-201ENST00000260653 MLXIPQ9HAP2 919 aa24.58■■□□□ 1.52
SIX3-201ENST00000260653 LUC7L2Q9Y383 392 aaKnown RBP24.58■■□□□ 1.52
SIX3-201ENST00000260653 MTERF2Q49AM1 385 aa24.57■■□□□ 1.52
SIX3-201ENST00000260653 PPP1R13BQ96KQ4 1090 aa24.57■■□□□ 1.52
SIX3-201ENST00000260653 AGPAT3Q9NRZ7 376 aa24.57■■□□□ 1.52
SIX3-201ENST00000260653 AGPAT5Q9NUQ2 364 aa24.57■■□□□ 1.52
SIX3-201ENST00000260653 SLC16A4O15374 487 aa24.57■■□□□ 1.52
SIX3-201ENST00000260653 OATP04181 439 aa24.57■■□□□ 1.52
SIX3-201ENST00000260653 TOGARAM2Q6ZUX3 1019 aa24.57■■□□□ 1.52
SIX3-201ENST00000260653 ARMCX2Q7L311 632 aa24.57■■□□□ 1.52
SIX3-201ENST00000260653 HS2ST1Q7LGA3 356 aa24.57■■□□□ 1.52
SIX3-201ENST00000260653 XPNPEP1Q9NQW7 623 aa24.57■■□□□ 1.52
SIX3-201ENST00000260653 DGAT1O75907 488 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 FECHP22830 423 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 TCF7P36402 384 aaPredicted RBP24.56■■□□□ 1.52
SIX3-201ENST00000260653 ZNF157P51786 506 aaPredicted RBP24.56■■□□□ 1.52
SIX3-201ENST00000260653 ZNF792Q3KQV3 632 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 HAUS6Q7Z4H7 955 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 FRMD5Q7Z6J6 570 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 RASAL3Q86YV0 1011 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 SYCP3Q8IZU3 236 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 RETREG2Q8NC44 543 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 NUP58Q9BVL2 599 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 NAA15Q9BXJ9 866 aaKnown RBP24.56■■□□□ 1.52
SIX3-201ENST00000260653 PDGFCQ9NRA1 345 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 FAM207AQ9NSI2 230 aaPredicted RBP24.56■■□□□ 1.52
SIX3-201ENST00000260653 ARMCX3Q9UH62 379 aaPredicted RBP24.56■■□□□ 1.52
SIX3-201ENST00000260653 IVNS1ABPQ9Y6Y0 642 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 ASB14A6NK59 587 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 TMEM63BQ5T3F8 832 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 KCNV1Q6PIU1 500 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 BSNDQ8WZ55 320 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 PDLIM7Q9NR12 457 aa24.56■■□□□ 1.52
SIX3-201ENST00000260653 EPHB6O15197 1021 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 SLC16A3O15427 465 aaKnown RBP24.55■■□□□ 1.52
SIX3-201ENST00000260653 NCKAP1LP55160 1127 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 ALCAMQ13740 583 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 NFIL3Q16649 462 aa24.55■■□□□ 1.52
SIX3-201ENST00000260653 CCDC62Q6P9F0 684 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms