RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CCNI2Q6ZMN8 369 aaPredicted RBP10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 CENPUQ71F23 418 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 RNPC3Q96LT9 517 aaKnown RBP10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 IQANK1A0A1B0GTG1 560 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 PODXLO00592 558 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 KCNQ4P56696 695 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 NOP14P78316 857 aaKnown RBP10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 DMP1Q13316 513 aaPredicted RBP10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 CYB5D1Q6P9G0 228 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 ENAHQ8N8S7 591 aaPredicted RBP10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 EFCAB6Q5THR3 1501 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 COPEO14579 308 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 ASPRV1Q53RT3 343 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 STAMBPL1Q96FJ0 436 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.44□□□□□ -0.747e-7■■■□□ 19
CTDSPL2-201ENST00000260327 STRIP2Q9ULQ0 834 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 NOC2LQ9Y3T9 749 aaKnown RBP10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 STK36Q9NRP7 1315 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 TET3O43151 1660 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 NCOA3Q9Y6Q9 1424 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 ZBED4O75132 1171 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 FXR1P51114 621 aaKnown RBP eCLIP10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 ITKQ08881 620 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 PRKG1Q13976 671 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 ARHGEF16Q5VV41 709 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 USPL1Q5W0Q7 1092 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 SPOPLQ6IQ16 392 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 CDAN1Q8IWY9 1227 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 PNMA2Q9UL42 364 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 GLI2P10070 1586 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 CDC42BPBQ9Y5S2 1711 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 A0A0G2JLW4 131 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 YARSP54577 528 aaKnown RBP10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 SNAP25P60880 206 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 RAD9BQ6WBX8 426 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 ANO5Q75V66 913 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 CHURC1Q8WUH1 139 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 ZIM3Q96PE6 472 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 MADDQ8WXG6 1647 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 GSTA4O15217 222 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 BTKQ06187 659 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 NYAP1Q6ZVC0 841 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 TC2NQ8N9U0 490 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 DNAJC9Q8WXX5 260 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 PNKPQ96T60 521 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 CALN1Q9BXU9 219 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 EIF2AQ9BY44 585 aaKnown RBP10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 DDX28Q9NUL7 540 aaKnown RBP10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 APOBEC2Q9Y235 224 aaKnown RBP10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 ERBB3P21860 1342 aa10.44□□□□□ -0.74
CTDSPL2-201ENST00000260327 FAM205CA6NFA0 338 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 PI4K2BG5E9Z4 385 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 MCF2LO15068 1137 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 SEC24DO94855 1032 aaPredicted RBP10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 TTLL1O95922 423 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 FCER1AP12319 257 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 DAB2P98082 770 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 TXNRD1Q16881 649 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 AMNQ9BXJ7 453 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 PICK1Q9NRD5 415 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 PNPLA6Q8IY17 1366 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 ATP10DQ9P241 1426 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 IGF2BP3O00425 579 aaKnown RBP eCLIP10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 NVLO15381 856 aaKnown RBP10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 PGM1P36871 562 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 ARL8AQ96BM9 186 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 ZNF577Q9BSK1 485 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 UPF3AQ9H1J1 476 aaKnown RBP10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 FBXO2Q9UK22 296 aaPredicted RBP10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 ZNF609O15014 1411 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 HNRNPDLO14979 420 aaKnown RBP10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 PDHBP11177 359 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 PAX7P23759 505 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 CCND1P24385 295 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 UNC13DQ70J99 1090 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 TEKT4Q8WW24 435 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 HPS3Q969F9 1004 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 CARD10Q9BWT7 1032 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 CCDC90BQ9GZT6 254 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 MIS12Q9H081 205 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 EHD2Q9NZN4 543 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 GJA3Q9Y6H8 435 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 ARHGAP31Q2M1Z3 1444 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 LRRIQ4A6NIV6 560 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 TCP10L2B9ZVM9 353 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 H3BQF6 201 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 HSPA4LO95757 839 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 EP400NLQ6ZTU2 488 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 PACS2Q86VP3 889 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 VTI1AQ96AJ9 217 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 POLR3CQ9BUI4 534 aaPredicted RBP10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 CEP72Q9P209 647 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 DBR1Q9UK59 544 aaKnown RBP10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 ARL2BPQ9Y2Y0 163 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 LOC102724428A0A0B4J2F2 783 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 GOLGA8QA0A0J9YX86 632 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 GOLGA8OA6NCC3 632 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 GOLGA8NF8WBI6 632 aa10.43□□□□□ -0.74
CTDSPL2-201ENST00000260327 SIK1P57059 783 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms