RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PCDHB7Q9Y5E2 793 aa21.46■■□□□ 1.03
TM6SF1-201ENST00000258909 GPR182O15218 404 aa21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 PSMD10O75832 226 aa21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 NLRP11P59045 1033 aaKnown RBP21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 Q4G0T1 1027 aa21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 NEK9Q8TD19 979 aa21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 KHSRPQ92945 711 aaKnown RBP eCLIP21.45■■□□□ 1.032e-6■■□□□ 11.4
TM6SF1-201ENST00000258909 PABPC5Q96DU9 382 aaKnown RBP21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 PLVAPQ9BX97 442 aa21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 C22orf23Q9BZE7 217 aa21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 LMAN2LQ9H0V9 348 aa21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 EPHX3Q9H6B9 360 aa21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 RGS18Q9NS28 235 aa21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 NRBP2Q9NSY0 501 aa21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 GJB4Q9NTQ9 266 aa21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 RAPGEFL1Q9UHV5 662 aa21.45■■□□□ 1.03
TM6SF1-201ENST00000258909 C5orf42Q9H799 3197 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 FNDC1Q4ZHG4 1894 aaPredicted RBP21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 MAGEB2O15479 319 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 COL9A1P20849 921 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 DNAJB1P25685 340 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 GTF2F1P35269 517 aaKnown RBP eCLIP21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 JAK3P52333 1124 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 CAMK1Q14012 370 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 INF2Q27J81 1249 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 FAM102BQ5T8I3 360 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 MIER3Q7Z3K6 550 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 KLHL23Q8NBE8 558 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 DAGLBQ8NCG7 672 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 IGFLR1Q9H665 355 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 TPCN1Q9ULQ1 816 aa21.45■■□□□ 1.02
TM6SF1-201ENST00000258909 CYP3A7-CYP3A51PA0A087WV96 503 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 TMEM150BA6NC51 233 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 C9IYK1 514 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 MMP1P03956 469 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 ITGB1P05556 798 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 CYP3A7P24462 503 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 SFNP31947 248 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 HYAL1Q12794 435 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 ODR4Q5SWX8 454 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 SLC24A5Q71RS6 500 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 LINC01465Q8N7H1 131 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 MAP7D2Q96T17 732 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 SH2D3AQ9BRG2 576 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 SLKQ9H2G2 1235 aaPredicted RBP21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 HCSTQ9UBK5 93 aa21.44■■□□□ 1.02
TM6SF1-201ENST00000258909 GRXCR2A6NFK2 248 aa21.43■■□□□ 1.02
TM6SF1-201ENST00000258909 TBKBP1A7MCY6 615 aa21.43■■□□□ 1.02
TM6SF1-201ENST00000258909 TMOD1P28289 359 aa21.43■■□□□ 1.02
TM6SF1-201ENST00000258909 NONOQ15233 471 aaKnown RBP eCLIP21.43■■□□□ 1.02
TM6SF1-201ENST00000258909 SPPL3Q8TCT6 385 aa21.43■■□□□ 1.02
TM6SF1-201ENST00000258909 P2RX5Q93086 422 aa21.43■■□□□ 1.02
TM6SF1-201ENST00000258909 ADAMTS10Q9H324 1103 aa21.43■■□□□ 1.02
TM6SF1-201ENST00000258909 C1orf112Q9NSG2 853 aa21.43■■□□□ 1.02
TM6SF1-201ENST00000258909 PPP4R2Q9NY27 417 aa21.43■■□□□ 1.02
TM6SF1-201ENST00000258909 FGFR1P11362 822 aa21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 IRS1P35568 1242 aa21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 LTBRP36941 435 aa21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 DLX2Q07687 328 aaPredicted RBP21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 COL19A1Q14993 1142 aa21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 CLUL1Q15846 466 aa21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 LETM2Q2VYF4 491 aa21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 SPOUT1Q5T280 376 aaKnown RBP21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 GALNT17Q6IS24 598 aa21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 FAM178BQ8IXR5 827 aa21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 ETNPPLQ8TBG4 499 aa21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 MBOAT7Q96N66 472 aa21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 SEPT9Q9UHD8 586 aaPredicted RBP21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 DDX25Q9UHL0 483 aaKnown RBP21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 PLXNA4Q9HCM2 1894 aa21.42■■□□□ 1.02
TM6SF1-201ENST00000258909 LINC01565O15544 149 aa21.41■■□□□ 1.02
TM6SF1-201ENST00000258909 SLC37A4O43826 429 aa21.41■■□□□ 1.02
TM6SF1-201ENST00000258909 TBC1D8BQ0IIM8 1120 aa21.41■■□□□ 1.02
TM6SF1-201ENST00000258909 DRP2Q13474 957 aa21.41■■□□□ 1.02
TM6SF1-201ENST00000258909 DSC3Q14574 896 aa21.41■■□□□ 1.02
TM6SF1-201ENST00000258909 MTERF2Q49AM1 385 aa21.41■■□□□ 1.02
TM6SF1-201ENST00000258909 KRT25Q7Z3Z0 450 aa21.41■■□□□ 1.02
TM6SF1-201ENST00000258909 POF1BQ8WVV4 589 aa21.41■■□□□ 1.02
TM6SF1-201ENST00000258909 PHF20Q9BVI0 1012 aa21.41■■□□□ 1.02
TM6SF1-201ENST00000258909 PFKFB2O60825 505 aa21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 CDKL5O76039 1030 aa21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 STBD1O95210 358 aa21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 FGFR4P22455 802 aa21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 EIF4BP23588 611 aaKnown RBP21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 GPC3P51654 580 aa21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 AK2P54819 239 aa21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 TARBP2Q15633 366 aaKnown RBP21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 B3GNT9Q6UX72 402 aa21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 ADGRD2Q7Z7M1 963 aa21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 OXER1Q8TDS5 423 aa21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 SCLT1Q96NL6 688 aa21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 ATP6V0A4Q9HBG4 840 aa21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 PCDHGC5Q9Y5F6 944 aa21.4■■□□□ 1.02
TM6SF1-201ENST00000258909 CCDC194A0A1B0GVG4 234 aa21.39■■□□□ 1.02
TM6SF1-201ENST00000258909 CSDE1O75534 798 aaKnown RBP21.39■■□□□ 1.02
TM6SF1-201ENST00000258909 CTDNEP1O95476 244 aa21.39■■□□□ 1.02
TM6SF1-201ENST00000258909 SSTR3P32745 418 aaPredicted RBP21.39■■□□□ 1.02
TM6SF1-201ENST00000258909 FAM189BP81408 668 aa21.39■■□□□ 1.02
TM6SF1-201ENST00000258909 CTC1Q2NKJ3 1217 aa21.39■■□□□ 1.02
TM6SF1-201ENST00000258909 NAALADL2Q58DX5 795 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms