RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 RGL1Q9NZL6 768 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 WRAP73Q9P2S5 460 aaPredicted RBP9.57□□□□□ -0.88
TMEM258-201ENST00000257262 CEP131Q9UPN4 1083 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 PCDHB6Q9Y5E3 794 aa9.57□□□□□ -0.88
TMEM258-201ENST00000257262 PTPRSQ13332 1948 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 EVPLQ92817 2033 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 SLITRK3O94933 977 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 C22orf31O95567 290 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 NUDT7P0C024 238 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 OR52Z1P0C646 297 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 SMAD3P84022 425 aaKnown RBP9.56□□□□□ -0.88
TMEM258-201ENST00000257262 CYP4A11Q02928 519 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 CTTNQ14247 550 aaKnown RBP9.56□□□□□ -0.88
TMEM258-201ENST00000257262 TARBP2Q15633 366 aaKnown RBP9.56□□□□□ -0.88
TMEM258-201ENST00000257262 MTERF2Q49AM1 385 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 PLEKHG4Q58EX7 1191 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 IER5Q5VY09 327 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 EFCAB12Q6NXP0 572 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 ANO5Q75V66 913 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 KIAA0319LQ8IZA0 1049 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 ZNF687Q8N1G0 1237 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 NME8Q8N427 588 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 DBF4BQ8NFT6 615 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 EIF2AK1Q9BQI3 630 aaKnown RBP9.56□□□□□ -0.88
TMEM258-201ENST00000257262 CELF4Q9BZC1 486 aaKnown RBP9.56□□□□□ -0.88
TMEM258-201ENST00000257262 MTIF3Q9H2K0 278 aaKnown RBP9.56□□□□□ -0.88
TMEM258-201ENST00000257262 CDHR5Q9HBB8 845 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 SEPT9Q9UHD8 586 aaPredicted RBP9.56□□□□□ -0.88
TMEM258-201ENST00000257262 CDY2AQ9Y6F7 541 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 SLC4A7Q9Y6M7 1214 aa9.56□□□□□ -0.88
TMEM258-201ENST00000257262 RANBP2P49792 3224 aaKnown RBP9.56□□□□□ -0.88
TMEM258-201ENST00000257262 TET1Q8NFU7 2136 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 ARID2Q68CP9 1835 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 TULP1O00294 542 aaPredicted RBP9.55□□□□□ -0.88
TMEM258-201ENST00000257262 ZBTB39O15060 712 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 MAGEB2O15479 319 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 DKC1O60832 514 aaKnown RBP eCLIP9.55□□□□□ -0.88
TMEM258-201ENST00000257262 BAIAP3O94812 1187 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 RPLP2P05387 115 aaKnown RBP9.55□□□□□ -0.88
TMEM258-201ENST00000257262 PDCP20941 246 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 SYT1P21579 422 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 MRPS6P82932 125 aaKnown RBP9.55□□□□□ -0.88
TMEM258-201ENST00000257262 PTGDRQ13258 359 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 IKBKEQ14164 716 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 RILPL1Q5EBL4 403 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 PPP1R15BQ5SWA1 713 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 PLA2G4FQ68DD2 849 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 HSCBQ8IWL3 235 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 TPH2Q8IWU9 490 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 C4orf19Q8IY42 314 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 LRRC71Q8N4P6 559 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 METTL13Q8N6R0 699 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 CEP89Q96ST8 783 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 HSD17B14Q9BPX1 270 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 LXNQ9BS40 222 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 ZSWIM4Q9H7M6 989 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 SUGCTQ9HAC7 445 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.55□□□□□ -0.88
TMEM258-201ENST00000257262 TRPV2Q9Y5S1 764 aa9.55□□□□□ -0.88
TMEM258-201ENST00000257262 A0A087WWV3 80 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 ABHD14A-ACY1A0A1B0GW23 586 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 VPS37CA5D8V6 355 aaPredicted RBP9.54□□□□□ -0.88
TMEM258-201ENST00000257262 M0QZ92 97 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 MAFO75444 373 aaPredicted RBP9.54□□□□□ -0.88
TMEM258-201ENST00000257262 VTNP04004 478 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 GHRP10912 638 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 ATP2A2P16615 1042 aaKnown RBP9.54□□□□□ -0.88
TMEM258-201ENST00000257262 TMOD1P28289 359 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 YWHABP31946 246 aaKnown RBP9.54□□□□□ -0.88
TMEM258-201ENST00000257262 PBX2P40425 430 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 KCNJ6P48051 423 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 CLCN3P51790 818 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 RABGGTBP53611 331 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 NPEPPSP55786 919 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 WDR5P61964 334 aaKnown RBP9.54□□□□□ -0.88
TMEM258-201ENST00000257262 TBC1D8BQ0IIM8 1120 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 LPIN1Q14693 890 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 FBXO47Q5MNV8 452 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.54□□□□□ -0.88
TMEM258-201ENST00000257262 OTUD6AQ7L8S5 288 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 TMCO2Q7Z6W1 182 aaPredicted RBP9.54□□□□□ -0.88
TMEM258-201ENST00000257262 FERMT3Q86UX7 667 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 LINC01465Q8N7H1 131 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 SEPT8Q92599 483 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 CEP170P1Q96L14 293 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 PPP1R16BQ96T49 567 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 PBX4Q9BYU1 374 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 IFIH1Q9BYX4 1025 aaKnown RBP9.54□□□□□ -0.88
TMEM258-201ENST00000257262 CYP26B1Q9NR63 512 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 GINS2Q9Y248 185 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 KDM3AQ9Y4C1 1321 aa9.54□□□□□ -0.88
TMEM258-201ENST00000257262 IGKV6-21A0A0C4DH24 114 aa9.53□□□□□ -0.88
TMEM258-201ENST00000257262 LAD1O00515 517 aa9.53□□□□□ -0.88
TMEM258-201ENST00000257262 GPR32O75388 356 aa9.53□□□□□ -0.88
TMEM258-201ENST00000257262 MED24O75448 989 aa9.53□□□□□ -0.88
TMEM258-201ENST00000257262 LYPLA2O95372 231 aa9.53□□□□□ -0.88
TMEM258-201ENST00000257262 SPATA31C1P0DKV0 1188 aa9.53□□□□□ -0.88
TMEM258-201ENST00000257262 DNAJB2P25686 324 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms