RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 SFI1A8K8P3 1242 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 SPDYE6P0CI01 402 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 HDLBPQ00341 1268 aaKnown RBP10.06□□□□□ -0.8
RPA1-201ENST00000254719 CLUL1Q15846 466 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 MAN2A1Q16706 1144 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 TEKT1Q969V4 418 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 PCDHA12Q9UN75 941 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 FAN1Q9Y2M0 1017 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 GCOM1H8Y6P7 765 aaPredicted RBP10.06□□□□□ -0.8
RPA1-201ENST00000254719 VIL1P09327 827 aaKnown RBP10.06□□□□□ -0.8
RPA1-201ENST00000254719 MYZAPP0CAP1 466 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 NOP2P46087 812 aaKnown RBP10.06□□□□□ -0.8
RPA1-201ENST00000254719 SLC15A2Q16348 729 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 C2CD5Q86YS7 1000 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 PROCA1Q8NCQ7 364 aaPredicted RBP10.06□□□□□ -0.8
RPA1-201ENST00000254719 SLC5A5Q92911 643 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 COG5Q9UP83 839 aa10.06□□□□□ -0.8
RPA1-201ENST00000254719 MYH9P35579 1960 aaKnown RBP10.05□□□□□ -0.8
RPA1-201ENST00000254719 PRLRP16471 622 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 INPP5BP32019 993 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 TNNC1P63316 161 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 GPATCH4Q5T3I0 446 aaKnown RBP10.05□□□□□ -0.8
RPA1-201ENST00000254719 MEI1Q5TIA1 1274 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 DNAI2Q9GZS0 605 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 PANK4Q9NVE7 773 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 TAS2R14Q9NYV8 317 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 CETN3O15182 167 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 FLT3P36888 993 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 UGCGQ16739 394 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 TTMPQ5BVD1 217 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 TMEM39BQ9GZU3 492 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 PI4KBQ9UBF8 816 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 CERKLQ49MI3 558 aaPredicted RBP10.05□□□□□ -0.8
RPA1-201ENST00000254719 SLFN13Q68D06 897 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 STYK1Q6J9G0 422 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 SYCP3Q8IZU3 236 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 DCAF4Q8WV16 495 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 JAKMIP2Q96AA8 810 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 OSBPL9Q96SU4 736 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 TMX2Q9Y320 296 aa10.05□□□□□ -0.8
RPA1-201ENST00000254719 PITPNM2Q9BZ72 1349 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 SZT2Q5T011 3432 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 TMCO5BA8MYB1 307 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 DDX3XO00571 662 aaKnown RBP eCLIP10.04□□□□□ -0.81e-8■■■■■ 27.9
RPA1-201ENST00000254719 GRIN3BO60391 1043 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 EDN1P05305 212 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 PPP2R5CQ13362 524 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 ZNF568Q3ZCX4 644 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 SFR1Q86XK3 245 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 SPATA4Q8NEY3 305 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 SLC7A5Q01650 507 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 UAP1Q16222 522 aaPredicted RBP10.04□□□□□ -0.8
RPA1-201ENST00000254719 NELFCDQ8IXH7 590 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 MMGT1Q8N4V1 131 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 FAM84AQ96KN4 292 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 COL4A3BPQ9Y5P4 624 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 ZSWIM8A7E2V4 1837 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 SHOX2O60902 331 aaPredicted RBP10.04□□□□□ -0.8
RPA1-201ENST00000254719 HSD17B4P51659 736 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 PSMD2Q13200 908 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 HLTFQ14527 1009 aaKnown RBP eCLIP10.04□□□□□ -0.8
RPA1-201ENST00000254719 SLC9C1Q4G0N8 1177 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 PHLDB3Q6NSJ2 640 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 PIGOQ8TEQ8 1089 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 RASAL2Q9UJF2 1139 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 BCS1LQ9Y276 419 aa10.04□□□□□ -0.8
RPA1-201ENST00000254719 ADSSP30520 456 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 ITIH3Q06033 890 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 IFFO1Q0D2I5 559 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 KCNH2Q12809 1159 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 NAB2Q15742 525 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 ELMO3Q96BJ8 720 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 NAP1L3Q99457 506 aaPredicted RBP10.03□□□□□ -0.8
RPA1-201ENST00000254719 EIF2AK1Q9BQI3 630 aaKnown RBP10.03□□□□□ -0.8
RPA1-201ENST00000254719 UNC45AQ9H3U1 944 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 EMILIN3Q9NT22 766 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 FAM170AA1A519 330 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 MACROD2A1Z1Q3 448 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 TRAF5O00463 557 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 NMT1P30419 496 aaKnown RBP10.03□□□□□ -0.8
RPA1-201ENST00000254719 FSTL1Q12841 308 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 NBPF9Q3BBW0 867 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 USH1GQ495M9 461 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 SLC39A4Q6P5W5 647 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 RRAGAQ7L523 313 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 REPS2Q8NFH8 660 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 CCDC17Q96LX7 622 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 TXLNGYQ9BZA5 131 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 FZD1Q9UP38 647 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 ZNF638Q14966 1978 aaKnown RBP10.03□□□□□ -0.8
RPA1-201ENST00000254719 SSU72P8A0A1W2PR75 194 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 CALUO43852 315 aaPredicted RBP10.03□□□□□ -0.8
RPA1-201ENST00000254719 ATP9AO75110 1047 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 FAM13AO94988 1023 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 LIG3P49916 1009 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 PABPC4Q13310 644 aaKnown RBP eCLIP10.03□□□□□ -0.81e-16■■□□□ 13.6
RPA1-201ENST00000254719 NLGN1Q8N2Q7 840 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 OGFOD1Q8N543 542 aa10.03□□□□□ -0.8
RPA1-201ENST00000254719 SYN2Q92777 582 aaPredicted RBP10.03□□□□□ -0.8
RPA1-201ENST00000254719 CENPHQ9H3R5 247 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms