RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 SSTR3P32745 418 aaPredicted RBP23.79■■□□□ 1.4
NEDD8-201ENST00000250495 HYAL1Q12794 435 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 TMEM31Q5JXX7 168 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 EFCAB12Q6NXP0 572 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 KLHL23Q8NBE8 558 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 SPPL3Q8TCT6 385 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 TBCKQ8TEA7 893 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 SLC5A5Q92911 643 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 MAP7D2Q96T17 732 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 TEKT3Q9BXF9 490 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 C9IYK1 514 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 OATP04181 439 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 ITGB1P05556 798 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 LTBRP36941 435 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 JAK3P52333 1124 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 CAMK1Q14012 370 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 LRCH2Q5VUJ6 765 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 FAM228AQ86W67 206 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 FAM177A1Q8N128 213 aaPredicted RBP23.78■■□□□ 1.4
NEDD8-201ENST00000250495 KHSRPQ92945 711 aaKnown RBP eCLIP23.78■■□□□ 1.44e-7■■□□□ 13.3
NEDD8-201ENST00000250495 PPP1R16BQ96T49 567 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 LRFN3Q9BTN0 628 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 IGFLR1Q9H665 355 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 AAASQ9NRG9 546 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 PRKAG3Q9UGI9 489 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 AKT3Q9Y243 479 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 PCDHB12Q9Y5F1 795 aa23.78■■□□□ 1.4
NEDD8-201ENST00000250495 WDR81Q562E7 1941 aa23.77■■□□□ 1.4
NEDD8-201ENST00000250495 GPR37L1O60883 481 aa23.77■■□□□ 1.4
NEDD8-201ENST00000250495 GATMP50440 423 aa23.77■■□□□ 1.4
NEDD8-201ENST00000250495 NLRP11P59045 1033 aaKnown RBP23.77■■□□□ 1.4
NEDD8-201ENST00000250495 FAM189BP81408 668 aa23.77■■□□□ 1.4
NEDD8-201ENST00000250495 Q4G0T1 1027 aa23.77■■□□□ 1.4
NEDD8-201ENST00000250495 SPOUT1Q5T280 376 aaKnown RBP23.77■■□□□ 1.4
NEDD8-201ENST00000250495 GALNT17Q6IS24 598 aa23.77■■□□□ 1.4
NEDD8-201ENST00000250495 BLIDQ8IZY5 108 aa23.77■■□□□ 1.4
NEDD8-201ENST00000250495 POF1BQ8WVV4 589 aa23.77■■□□□ 1.4
NEDD8-201ENST00000250495 RAPGEFL1Q9UHV5 662 aa23.77■■□□□ 1.4
NEDD8-201ENST00000250495 ZNF862O60290 1169 aa23.76■■□□□ 1.39
NEDD8-201ENST00000250495 CSPG5O95196 566 aa23.76■■□□□ 1.39
NEDD8-201ENST00000250495 CLCN3P51790 818 aa23.76■■□□□ 1.39
NEDD8-201ENST00000250495 RDM1Q8NG50 284 aa23.76■■□□□ 1.39
NEDD8-201ENST00000250495 ELAC1Q9H777 363 aaKnown RBP23.76■■□□□ 1.39
NEDD8-201ENST00000250495 ATP6V0A4Q9HBG4 840 aa23.76■■□□□ 1.39
NEDD8-201ENST00000250495 TMEM161AQ9NX61 479 aa23.76■■□□□ 1.39
NEDD8-201ENST00000250495 ATG2AQ2TAZ0 1938 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 CYP3A7-CYP3A51PA0A087WV96 503 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 TBKBP1A7MCY6 615 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 CHMP2AO43633 222 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 ZSCAN20P17040 1043 aaPredicted RBP23.75■■□□□ 1.39
NEDD8-201ENST00000250495 CYP3A7P24462 503 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 DNAJB1P25685 340 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 PRKCEQ02156 737 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 ADAM15Q13444 863 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 FAM102BQ5T8I3 360 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 LINC01465Q8N7H1 131 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 UPF3BQ9BZI7 483 aaKnown RBP23.75■■□□□ 1.39
NEDD8-201ENST00000250495 UNC45AQ9H3U1 944 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 PDRG1Q9NUG6 133 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 KIAA1671Q9BY89 1806 aa23.75■■□□□ 1.39
NEDD8-201ENST00000250495 PSMD10O75832 226 aa23.74■■□□□ 1.39
NEDD8-201ENST00000250495 ALADP13716 330 aa23.74■■□□□ 1.39
NEDD8-201ENST00000250495 EIF4BP23588 611 aaKnown RBP23.74■■□□□ 1.39
NEDD8-201ENST00000250495 UBE3AQ05086 875 aa23.74■■□□□ 1.39
NEDD8-201ENST00000250495 DLX2Q07687 328 aaPredicted RBP23.74■■□□□ 1.39
NEDD8-201ENST00000250495 STK3Q13188 491 aa23.74■■□□□ 1.39
NEDD8-201ENST00000250495 DSC3Q14574 896 aa23.74■■□□□ 1.39
NEDD8-201ENST00000250495 MIER3Q7Z3K6 550 aa23.74■■□□□ 1.39
NEDD8-201ENST00000250495 LRRC71Q8N4P6 559 aa23.74■■□□□ 1.39
NEDD8-201ENST00000250495 DAGLBQ8NCG7 672 aa23.74■■□□□ 1.39
NEDD8-201ENST00000250495 LARP6Q9BRS8 491 aaKnown RBP23.74■■□□□ 1.39
NEDD8-201ENST00000250495 ADAMTS10Q9H324 1103 aa23.74■■□□□ 1.39
NEDD8-201ENST00000250495 FNDC1Q4ZHG4 1894 aaPredicted RBP23.73■■□□□ 1.39
NEDD8-201ENST00000250495 GTF2F1P35269 517 aaKnown RBP eCLIP23.73■■□□□ 1.39
NEDD8-201ENST00000250495 TBC1D8BQ0IIM8 1120 aa23.73■■□□□ 1.39
NEDD8-201ENST00000250495 CSPP1Q1MSJ5 1256 aa23.73■■□□□ 1.39
NEDD8-201ENST00000250495 MOXD1Q6UVY6 613 aa23.73■■□□□ 1.39
NEDD8-201ENST00000250495 M0R2N6 131 aa23.72■■□□□ 1.39
NEDD8-201ENST00000250495 HOXA2O43364 376 aa23.72■■□□□ 1.39
NEDD8-201ENST00000250495 CDKL5O76039 1030 aa23.72■■□□□ 1.39
NEDD8-201ENST00000250495 IRS1P35568 1242 aa23.72■■□□□ 1.39
NEDD8-201ENST00000250495 CDC42EP1Q00587 391 aa23.72■■□□□ 1.39
NEDD8-201ENST00000250495 NONOQ15233 471 aaKnown RBP eCLIP23.72■■□□□ 1.39
NEDD8-201ENST00000250495 SMAD2Q15796 467 aaKnown RBP23.72■■□□□ 1.39
NEDD8-201ENST00000250495 UGCGQ16739 394 aa23.72■■□□□ 1.39
NEDD8-201ENST00000250495 XKR3Q5GH77 459 aa23.72■■□□□ 1.39
NEDD8-201ENST00000250495 ADHFE1Q8IWW8 467 aa23.72■■□□□ 1.39
NEDD8-201ENST00000250495 MICAL1Q8TDZ2 1067 aa23.72■■□□□ 1.39
NEDD8-201ENST00000250495 GJA10Q969M2 543 aa23.72■■□□□ 1.39
NEDD8-201ENST00000250495 MBOAT7Q96N66 472 aa23.72■■□□□ 1.39
NEDD8-201ENST00000250495 NIFKQ9BYG3 293 aaKnown RBP23.72■■□□□ 1.39
NEDD8-201ENST00000250495 TYW1Q9NV66 732 aaKnown RBP23.72■■□□□ 1.39
NEDD8-201ENST00000250495 CD207Q9UJ71 328 aa23.72■■□□□ 1.39
NEDD8-201ENST00000250495 LINC01565O15544 149 aa23.71■■□□□ 1.39
NEDD8-201ENST00000250495 MBTPS2O43462 519 aa23.71■■□□□ 1.39
NEDD8-201ENST00000250495 TDP2O95551 362 aa23.71■■□□□ 1.39
NEDD8-201ENST00000250495 NDUFV1P49821 464 aa23.71■■□□□ 1.39
NEDD8-201ENST00000250495 GPC3P51654 580 aa23.71■■□□□ 1.39
NEDD8-201ENST00000250495 ZP2Q05996 745 aa23.71■■□□□ 1.39
NEDD8-201ENST00000250495 SMAD4Q13485 552 aaKnown RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms