RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 FAM153BP0C7A2 387 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 SLC20A2Q08357 652 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 FAM153CQ494X1 144 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 TTMPQ5BVD1 217 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 DNAJC21Q5F1R6 531 aaKnown RBP17.91■□□□□ 0.46
HOXD3-201ENST00000249440 LRCH2Q5VUJ6 765 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 C1orf186Q6ZWK4 172 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 KLHL7Q8IXQ5 586 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 FAM186BQ8IYM0 893 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 SPICE1Q8N0Z3 855 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 EIF1ADQ8N9N8 165 aaKnown RBP17.91■□□□□ 0.46
HOXD3-201ENST00000249440 TPCN2Q8NHX9 752 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 CASKIN2Q8WXE0 1202 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 ARL8AQ96BM9 186 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 CALR3Q96L12 384 aaKnown RBP17.91■□□□□ 0.46
HOXD3-201ENST00000249440 PLEKHA4Q9H4M7 779 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 BCAS3Q9H6U6 928 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 PARVGQ9HBI0 331 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 FAM153AQ9UHL3 310 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 NENFQ9UMX5 172 aa17.91■□□□□ 0.46
HOXD3-201ENST00000249440 SHTN1A0MZ66 631 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 CEP104O60308 925 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 CFBP00751 764 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 STAT1P42224 750 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 JAG1P78504 1218 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 SYCE1Q8N0S2 351 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 SCFD2Q8WU76 684 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 CSRNP1Q96S65 589 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 MKNK1Q9BUB5 465 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 SLX4Q8IY92 1834 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 TRIM66O15016 1216 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 PSMD10O75832 226 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 GFPT2O94808 682 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 KRT14P02533 472 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 NMT1P30419 496 aaKnown RBP17.9■□□□□ 0.46
HOXD3-201ENST00000249440 SKOR1P84550 965 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 PPP2R5CQ13362 524 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 STXBP4Q6ZWJ1 553 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 PEX26Q7Z412 305 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 ZFP91Q96JP5 570 aaPredicted RBP17.9■□□□□ 0.46
HOXD3-201ENST00000249440 TAF1DQ9H5J8 278 aaPredicted RBP17.9■□□□□ 0.46
HOXD3-201ENST00000249440 SEL1LQ9UBV2 794 aa17.9■□□□□ 0.46
HOXD3-201ENST00000249440 ZMYM2Q9UBW7 1377 aa17.89■□□□□ 0.46
HOXD3-201ENST00000249440 TMCO5BA8MYB1 307 aa17.89■□□□□ 0.46
HOXD3-201ENST00000249440 MUTP22033 750 aa17.89■□□□□ 0.46
HOXD3-201ENST00000249440 GUCY2FP51841 1108 aa17.89■□□□□ 0.46
HOXD3-201ENST00000249440 NPEPPSP55786 919 aa17.89■□□□□ 0.46
HOXD3-201ENST00000249440 SLFN11Q7Z7L1 901 aa17.89■□□□□ 0.46
HOXD3-201ENST00000249440 CD302Q8IX05 232 aa17.89■□□□□ 0.46
HOXD3-201ENST00000249440 DYDC2Q96IM9 177 aa17.89■□□□□ 0.46
HOXD3-201ENST00000249440 WDR18Q9BV38 432 aa17.89■□□□□ 0.46
HOXD3-201ENST00000249440 ISCUQ9H1K1 167 aa17.89■□□□□ 0.46
HOXD3-201ENST00000249440 GOLPH3Q9H4A6 298 aa17.89■□□□□ 0.46
HOXD3-201ENST00000249440 ARHGEF10LQ9HCE6 1279 aa17.89■□□□□ 0.46
HOXD3-201ENST00000249440 AJAP1Q9UKB5 411 aaPredicted RBP17.89■□□□□ 0.46
HOXD3-201ENST00000249440 ZNF646O15015 1829 aaPredicted RBP17.89■□□□□ 0.45
HOXD3-201ENST00000249440 UBE4BO95155 1302 aa17.89■□□□□ 0.45
HOXD3-201ENST00000249440 PGRMC1O00264 195 aaKnown RBP17.89■□□□□ 0.45
HOXD3-201ENST00000249440 DDX3XO00571 662 aaKnown RBP eCLIP17.89■□□□□ 0.45
HOXD3-201ENST00000249440 EIF3HO15372 352 aaKnown RBP eCLIP17.89■□□□□ 0.45
HOXD3-201ENST00000249440 CHMP2AO43633 222 aa17.89■□□□□ 0.45
HOXD3-201ENST00000249440 GNGT1P63211 74 aa17.89■□□□□ 0.45
HOXD3-201ENST00000249440 CC2D2BQ6DHV5 1058 aa17.89■□□□□ 0.45
HOXD3-201ENST00000249440 GJB7Q6PEY0 223 aa17.89■□□□□ 0.45
HOXD3-201ENST00000249440 HS2ST1Q7LGA3 356 aa17.89■□□□□ 0.45
HOXD3-201ENST00000249440 SLC5A5Q92911 643 aa17.89■□□□□ 0.45
HOXD3-201ENST00000249440 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.89■□□□□ 0.45
HOXD3-201ENST00000249440 KCND2Q9NZV8 630 aa17.89■□□□□ 0.45
HOXD3-201ENST00000249440 CCDC188H7C350 402 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 GCOM1H8Y6P7 765 aaPredicted RBP17.88■□□□□ 0.45
HOXD3-201ENST00000249440 POLR2MP0CAP2 368 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 PRELPP51888 382 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 CUL1Q13616 776 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 ZC2HC1CQ53FD0 456 aaPredicted RBP17.88■□□□□ 0.45
HOXD3-201ENST00000249440 DNAAF5Q86Y56 855 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 FMNL3Q8IVF7 1028 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 SUCLA2Q9P2R7 463 aaPredicted RBP17.88■□□□□ 0.45
HOXD3-201ENST00000249440 ZNF219Q9P2Y4 722 aaPredicted RBP17.88■□□□□ 0.45
HOXD3-201ENST00000249440 HERC5Q9UII4 1024 aaKnown RBP17.88■□□□□ 0.45
HOXD3-201ENST00000249440 MYH11P35749 1972 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 COL2A1P02458 1487 aaPredicted RBP17.88■□□□□ 0.45
HOXD3-201ENST00000249440 ZNF233A6NK53 670 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 EVI5O60447 810 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 GAS7O60861 476 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 SOX5P35711 763 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 FMO5P49326 533 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 RRP1BQ14684 758 aaKnown RBP17.88■□□□□ 0.45
HOXD3-201ENST00000249440 ZNF720Q7Z2F6 126 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 DAAM2Q86T65 1068 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 FAM178BQ8IXR5 827 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 METTL13Q8N6R0 699 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 BCAS4Q8TDM0 211 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 U2AF1L4Q8WU68 220 aaKnown RBP17.88■□□□□ 0.45
HOXD3-201ENST00000249440 NACC1Q96RE7 527 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 STK33Q9BYT3 514 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 EHMT1Q9H9B1 1298 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.88■□□□□ 0.45
HOXD3-201ENST00000249440 FRMD4BQ9Y2L6 1034 aa17.88■□□□□ 0.45
HOXD3-201ENST00000249440 FRMPD4Q14CM0 1322 aa17.87■□□□□ 0.45
HOXD3-201ENST00000249440 LMNB1P20700 586 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms