RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ERMNQ8TAM6 284 aa27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 CEP170P1Q96L14 293 aa27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 ZNF576Q9H609 170 aa27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 WRAP73Q9P2S5 460 aaPredicted RBP27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 PCDHB6Q9Y5E3 794 aa27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 STK24Q9Y6E0 443 aa27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 POTEMA6NI47 508 aa27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 RFC5P40937 340 aa27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 PAK2Q13177 524 aa27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.23■■□□□ 1.954e-6■□□□□ 8.1
SDF2L1-201ENST00000248958 HSCBQ8IWL3 235 aa27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 SLC7A3Q8WY07 619 aa27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 ZBED2Q9BTP6 218 aa27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 RAB34Q9BZG1 259 aa27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 NKX2-4Q9H2Z4 354 aa27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 TTYH1Q9H313 450 aaPredicted RBP27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 AGO3Q9H9G7 860 aaKnown RBP27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 TUFT1Q9NNX1 390 aa27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 GINS2Q9Y248 185 aa27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 YBX2Q9Y2T7 364 aaKnown RBP27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 ARID2Q68CP9 1835 aa27.23■■□□□ 1.95
SDF2L1-201ENST00000248958 TMEM150BA6NC51 233 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 TLL1O43897 1013 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 GPR32O75388 356 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 GJB5O95377 273 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 VTNP04004 478 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 XRCC6P12956 609 aaKnown RBP eCLIP27.22■■□□□ 1.951e-20■□□□□ 9.3
SDF2L1-201ENST00000248958 CD52P31358 61 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 PRPHP41219 470 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 FXR2P51116 673 aaKnown RBP eCLIP27.22■■□□□ 1.954e-7■□□□□ 8.1
SDF2L1-201ENST00000248958 PTGDRQ13258 359 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 NBR1Q14596 966 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 PLA2G4FQ68DD2 849 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 BRAPQ7Z569 592 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 MYOCDQ8IZQ8 938 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 ANKEF1Q9NU02 776 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 PADI3Q9ULW8 664 aa27.22■■□□□ 1.95
SDF2L1-201ENST00000248958 GPR182O15218 404 aa27.21■■□□□ 1.95
SDF2L1-201ENST00000248958 GAS2O43903 313 aaKnown RBP27.21■■□□□ 1.95
SDF2L1-201ENST00000248958 RPS6KA5O75582 802 aa27.21■■□□□ 1.95
SDF2L1-201ENST00000248958 NLRP11P59045 1033 aaKnown RBP27.21■■□□□ 1.95
SDF2L1-201ENST00000248958 PDIA5Q14554 519 aa27.21■■□□□ 1.95
SDF2L1-201ENST00000248958 KIZQ2M2Z5 673 aa27.21■■□□□ 1.95
SDF2L1-201ENST00000248958 TOP1MTQ969P6 601 aa27.21■■□□□ 1.95
SDF2L1-201ENST00000248958 RAD9AQ99638 391 aa27.21■■□□□ 1.95
SDF2L1-201ENST00000248958 SH2D3AQ9BRG2 576 aa27.21■■□□□ 1.95
SDF2L1-201ENST00000248958 POLR3CQ9BUI4 534 aaPredicted RBP27.21■■□□□ 1.95
SDF2L1-201ENST00000248958 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.2■■□□□ 1.94
SDF2L1-201ENST00000248958 MUTP22033 750 aa27.2■■□□□ 1.94
SDF2L1-201ENST00000248958 GPC3P51654 580 aa27.2■■□□□ 1.94
SDF2L1-201ENST00000248958 POLGP54098 1239 aaPredicted RBP27.2■■□□□ 1.94
SDF2L1-201ENST00000248958 NPEPPSP55786 919 aa27.2■■□□□ 1.94
SDF2L1-201ENST00000248958 XKR9Q5GH70 373 aa27.2■■□□□ 1.94
SDF2L1-201ENST00000248958 HAUS3Q68CZ6 603 aa27.2■■□□□ 1.94
SDF2L1-201ENST00000248958 FAM161BQ96MY7 647 aa27.2■■□□□ 1.94
SDF2L1-201ENST00000248958 OSMRQ99650 979 aa27.2■■□□□ 1.94
SDF2L1-201ENST00000248958 DHX33Q9H6R0 707 aaKnown RBP27.2■■□□□ 1.94
SDF2L1-201ENST00000248958 RPA1P27694 616 aa27.19■■□□□ 1.94
SDF2L1-201ENST00000248958 PPP2R2DQ66LE6 453 aa27.19■■□□□ 1.94
SDF2L1-201ENST00000248958 ADAMTS10Q9H324 1103 aa27.19■■□□□ 1.94
SDF2L1-201ENST00000248958 CDHR5Q9HBB8 845 aa27.19■■□□□ 1.94
SDF2L1-201ENST00000248958 NOC2LQ9Y3T9 749 aaKnown RBP27.19■■□□□ 1.94
SDF2L1-201ENST00000248958 INSL6Q9Y581 213 aa27.19■■□□□ 1.94
SDF2L1-201ENST00000248958 VPS37CA5D8V6 355 aaPredicted RBP27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 ENPP3O14638 875 aa27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 MYOGP15173 224 aa27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 NFX1Q12986 1120 aaKnown RBP27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 DTHD1Q6ZMT9 781 aa27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 ZNF410Q86VK4 478 aa27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 CATSPER3Q86XQ3 398 aa27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 TMEM40Q8WWA1 233 aa27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 TCP11Q8WWU5 503 aa27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 CCDC43Q96MW1 224 aaKnown RBP27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 PPP1R16BQ96T49 567 aa27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 ERVK-5Q9HDB9 667 aa27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 SUCLA2Q9P2R7 463 aaPredicted RBP27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 LRWD1Q9UFC0 647 aa27.18■■□□□ 1.94
SDF2L1-201ENST00000248958 CA3P07451 260 aa27.17■■□□□ 1.94
SDF2L1-201ENST00000248958 SPATA31C1P0DKV0 1188 aa27.17■■□□□ 1.94
SDF2L1-201ENST00000248958 EIF4BP23588 611 aaKnown RBP27.17■■□□□ 1.94
SDF2L1-201ENST00000248958 ATP2C1P98194 919 aaPredicted RBP27.17■■□□□ 1.94
SDF2L1-201ENST00000248958 SCLT1Q96NL6 688 aa27.17■■□□□ 1.94
SDF2L1-201ENST00000248958 GUCD1Q96NT3 240 aa27.17■■□□□ 1.94
SDF2L1-201ENST00000248958 NACC1Q96RE7 527 aa27.17■■□□□ 1.94
SDF2L1-201ENST00000248958 RNF216Q9NWF9 866 aaPredicted RBP27.17■■□□□ 1.94
SDF2L1-201ENST00000248958 ST3GAL5Q9UNP4 418 aa27.17■■□□□ 1.94
SDF2L1-201ENST00000248958 BMP15O95972 392 aa27.16■■□□□ 1.94
SDF2L1-201ENST00000248958 SYT1P21579 422 aa27.16■■□□□ 1.94
SDF2L1-201ENST00000248958 DRP2Q13474 957 aa27.16■■□□□ 1.94
SDF2L1-201ENST00000248958 IGSF22Q8N9C0 903 aa27.16■■□□□ 1.94
SDF2L1-201ENST00000248958 NLRP7Q8WX94 980 aa27.16■■□□□ 1.94
SDF2L1-201ENST00000248958 MTRQ99707 1265 aa27.16■■□□□ 1.94
SDF2L1-201ENST00000248958 GCOM2Q9BZD3 368 aaPredicted RBP27.16■■□□□ 1.94
SDF2L1-201ENST00000248958 INO80BQ9C086 356 aaPredicted RBP27.16■■□□□ 1.94
SDF2L1-201ENST00000248958 TSPYL2Q9H2G4 693 aaPredicted RBP27.16■■□□□ 1.94
SDF2L1-201ENST00000248958 STXBP5LQ9Y2K9 1186 aa27.16■■□□□ 1.94
SDF2L1-201ENST00000248958 TTC3P53804 2025 aa27.16■■□□□ 1.94
SDF2L1-201ENST00000248958 ZBTB39O15060 712 aa27.15■■□□□ 1.94
SDF2L1-201ENST00000248958 ASAP2O43150 1006 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms