RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 HSDL1Q3SXM5 330 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 TMEM63BQ5T3F8 832 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 TAPT1Q6NXT6 567 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 MAMDC4Q6UXC1 1216 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 STXBP4Q6ZWJ1 553 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 AFAP1L1Q8TED9 768 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 SCFD2Q8WU76 684 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 GPR20Q99678 358 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 DIS3Q9Y2L1 958 aaKnown RBP16.77■□□□□ 0.28
HDHD3-201ENST00000238379 PCDHB13Q9Y5F0 798 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 MYH11P35749 1972 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 UBE4BO95155 1302 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 ZMYM2Q9UBW7 1377 aa16.77■□□□□ 0.28
HDHD3-201ENST00000238379 MYH9P35579 1960 aaKnown RBP16.77■□□□□ 0.27
HDHD3-201ENST00000238379 A0A1W2PQC6 194 aa16.77■□□□□ 0.27
HDHD3-201ENST00000238379 CALUO43852 315 aaPredicted RBP16.77■□□□□ 0.27
HDHD3-201ENST00000238379 OATP04181 439 aa16.77■□□□□ 0.27
HDHD3-201ENST00000238379 SKILP12757 684 aa16.77■□□□□ 0.27
HDHD3-201ENST00000238379 MARSP56192 900 aaKnown RBP16.77■□□□□ 0.27
HDHD3-201ENST00000238379 TTLL4Q14679 1199 aa16.77■□□□□ 0.27
HDHD3-201ENST00000238379 CEP135Q66GS9 1140 aa16.77■□□□□ 0.27
HDHD3-201ENST00000238379 DPP9Q86TI2 863 aa16.77■□□□□ 0.27
HDHD3-201ENST00000238379 DHX37Q8IY37 1157 aaKnown RBP16.77■□□□□ 0.27
HDHD3-201ENST00000238379 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.27
HDHD3-201ENST00000238379 CCDC102AQ96A19 550 aa16.77■□□□□ 0.27
HDHD3-201ENST00000238379 NOC4LQ9BVI4 516 aaKnown RBP16.77■□□□□ 0.27
HDHD3-201ENST00000238379 KATNBL1Q9H079 304 aa16.77■□□□□ 0.27
HDHD3-201ENST00000238379 VTA1Q9NP79 307 aa16.77■□□□□ 0.27
HDHD3-201ENST00000238379 SLC15A5A6NIM6 579 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 CETN3O15182 167 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 DGAT1O75907 488 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 GNA14O95837 355 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 SNAI1O95863 264 aaPredicted RBP16.76■□□□□ 0.27
HDHD3-201ENST00000238379 TPM2P07951 284 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 NR2F2P24468 414 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 STAT5BP51692 787 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 GOLGA8FQ08AF8 430 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 GOLGA8DPQ0D2H9 430 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 FAM102BQ5T8I3 360 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 C17orf99Q6UX52 265 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 KSR1Q8IVT5 923 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 TC2NQ8N9U0 490 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 COPS5Q92905 334 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 MAML3Q96JK9 1138 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 NIFKQ9BYG3 293 aaKnown RBP16.76■□□□□ 0.27
HDHD3-201ENST00000238379 IKZF4Q9H2S9 585 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 ST6GALNAC4Q9H4F1 302 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 XPNPEP1Q9NQW7 623 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.76■□□□□ 0.27
HDHD3-201ENST00000238379 ARID2Q68CP9 1835 aa16.76■□□□□ 0.27
HDHD3-201ENST00000238379 RBM47A0AV96 593 aaKnown RBP16.75■□□□□ 0.27
HDHD3-201ENST00000238379 PES1O00541 588 aaKnown RBP16.75■□□□□ 0.27
HDHD3-201ENST00000238379 TLR2O60603 784 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 TBC1D8BQ0IIM8 1120 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 ALCAMQ13740 583 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 MAN2A1Q16706 1144 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 VWA3BQ502W6 1294 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 FAM160B1Q5W0V3 765 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 KIFAP3Q92845 792 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 TMX1Q9H3N1 280 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 NDST4Q9H3R1 872 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 ABT1Q9ULW3 272 aaKnown RBP16.75■□□□□ 0.27
HDHD3-201ENST00000238379 K7ENM7 598 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 LGR5O75473 907 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 NR3C1P04150 777 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 GYPCP04921 128 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 NCKAP1LP55160 1127 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 PEX3P56589 373 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 RBL2Q08999 1139 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 NFIL3Q16649 462 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 MTERF2Q49AM1 385 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 MORN1Q5T089 497 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 PPFIBP1Q86W92 1011 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 TRIM59Q8IWR1 403 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 C17orf53Q8N3J3 647 aaPredicted RBP16.75■□□□□ 0.27
HDHD3-201ENST00000238379 MCPH1Q8NEM0 835 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 NPLOC4Q8TAT6 608 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 HHIPL1Q96JK4 782 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 SPATA33Q96N06 139 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 CEP89Q96ST8 783 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 NTPCRQ9BSD7 190 aaKnown RBP16.75■□□□□ 0.27
HDHD3-201ENST00000238379 C17orf75Q9HAS0 396 aa16.75■□□□□ 0.27
HDHD3-201ENST00000238379 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.75■□□□□ 0.27
HDHD3-201ENST00000238379 ZNF236Q9UL36 1845 aa16.74■□□□□ 0.27
HDHD3-201ENST00000238379 TMEM88BA6NKF7 163 aa16.74■□□□□ 0.27
HDHD3-201ENST00000238379 NOP56O00567 594 aaKnown RBP16.74■□□□□ 0.27
HDHD3-201ENST00000238379 RPL13P26373 211 aaKnown RBP16.74■□□□□ 0.27
HDHD3-201ENST00000238379 CLCN1P35523 988 aa16.74■□□□□ 0.27
HDHD3-201ENST00000238379 ADKP55263 362 aaKnown RBP16.74■□□□□ 0.27
HDHD3-201ENST00000238379 SOX10P56693 466 aa16.74■□□□□ 0.27
HDHD3-201ENST00000238379 GTF2BQ00403 316 aa16.74■□□□□ 0.27
HDHD3-201ENST00000238379 TARBP2Q15633 366 aaKnown RBP16.74■□□□□ 0.27
HDHD3-201ENST00000238379 CCDC40Q4G0X9 1142 aa16.74■□□□□ 0.27
HDHD3-201ENST00000238379 HAUS6Q7Z4H7 955 aa16.74■□□□□ 0.27
HDHD3-201ENST00000238379 GBP3Q9H0R5 595 aa16.74■□□□□ 0.27
HDHD3-201ENST00000238379 AZI2Q9H6S1 392 aa16.74■□□□□ 0.27
HDHD3-201ENST00000238379 ATP6V0A4Q9HBG4 840 aa16.74■□□□□ 0.27
HDHD3-201ENST00000238379 AKR1B15C9JRZ8 316 aaPredicted RBP16.73■□□□□ 0.27
HDHD3-201ENST00000238379 NPTX2P47972 431 aa16.73■□□□□ 0.27
HDHD3-201ENST00000238379 TM4SF4P48230 202 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms