RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 SPATA31A1Q5TZJ5 1347 aa20.19■□□□□ 0.82
PKD2-201ENST00000237596 WDR46O15213 610 aaKnown RBP20.19■□□□□ 0.82
PKD2-201ENST00000237596 ZBED1O96006 694 aa20.19■□□□□ 0.82
PKD2-201ENST00000237596 IFNAR2P48551 515 aa20.19■□□□□ 0.82
PKD2-201ENST00000237596 LXNQ9BS40 222 aa20.19■□□□□ 0.82
PKD2-201ENST00000237596 STK38LQ9Y2H1 464 aa20.19■□□□□ 0.82
PKD2-201ENST00000237596 PSMA2P25787 234 aa20.18■□□□□ 0.82
PKD2-201ENST00000237596 RWDD2BP57060 319 aa20.18■□□□□ 0.82
PKD2-201ENST00000237596 SPATA33Q96N06 139 aa20.18■□□□□ 0.82
PKD2-201ENST00000237596 MSH2P43246 934 aa20.18■□□□□ 0.82
PKD2-201ENST00000237596 IL9RQ01113 521 aa20.18■□□□□ 0.82
PKD2-201ENST00000237596 ZNF449Q6P9G9 518 aa20.18■□□□□ 0.82
PKD2-201ENST00000237596 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.18■□□□□ 0.82
PKD2-201ENST00000237596 ATP6V1E2Q96A05 226 aa20.18■□□□□ 0.82
PKD2-201ENST00000237596 PRCPP42785 496 aa20.18■□□□□ 0.82
PKD2-201ENST00000237596 KNOP1Q1ED39 458 aaKnown RBP20.18■□□□□ 0.82
PKD2-201ENST00000237596 LGALS16A8MUM7 142 aa20.18■□□□□ 0.82
PKD2-201ENST00000237596 DHX9Q08211 1270 aaKnown RBP20.18■□□□□ 0.82
PKD2-201ENST00000237596 THOC5Q13769 683 aaKnown RBP20.18■□□□□ 0.82
PKD2-201ENST00000237596 PDE11AQ9HCR9 933 aa20.18■□□□□ 0.82
PKD2-201ENST00000237596 POLIQ9UNA4 740 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 SLC8A2Q9UPR5 921 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 KCNH2Q12809 1159 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 PCDHA10Q9Y5I2 948 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 PPP6R3Q5H9R7 873 aaPredicted RBP20.17■□□□□ 0.82
PKD2-201ENST00000237596 SH2D4BQ5SQS7 431 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 BZW1Q7L1Q6 419 aaKnown RBP20.17■□□□□ 0.82
PKD2-201ENST00000237596 RAB44Q7Z6P3 723 aaPredicted RBP20.17■□□□□ 0.82
PKD2-201ENST00000237596 BEST2Q8NFU1 509 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 TLK1Q9UKI8 766 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 CASQ2O14958 399 aaPredicted RBP20.17■□□□□ 0.82
PKD2-201ENST00000237596 BNIP3LO60238 219 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 CIITAP33076 1130 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 COG2Q14746 738 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 TRIP13Q15645 432 aaPredicted RBP20.17■□□□□ 0.82
PKD2-201ENST00000237596 BBS9Q3SYG4 887 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 CEP55Q53EZ4 464 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 TMEM270Q6UE05 265 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 MTMR4Q9NYA4 1195 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 MED14O60244 1454 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 TRPM1Q7Z4N2 1603 aa20.17■□□□□ 0.82
PKD2-201ENST00000237596 ASB14A6NK59 587 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 C2orf54Q08AI8 447 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 MFSD14CQ5VZR4 134 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 JADE1Q6IE81 842 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 ZNF668Q96K58 619 aaPredicted RBP20.16■□□□□ 0.82
PKD2-201ENST00000237596 ZWILCHQ9H900 591 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 CNOT8Q9UFF9 292 aaKnown RBP20.16■□□□□ 0.82
PKD2-201ENST00000237596 PP2D1A8MPX8 630 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 SATB1Q01826 763 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 CEP72Q9P209 647 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 R3HDM1Q15032 1099 aaKnown RBP20.16■□□□□ 0.82
PKD2-201ENST00000237596 SCN4BQ8IWT1 228 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 PDIK1LQ8N165 341 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 PARD3BQ8TEW8 1205 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 ADCY1Q08828 1119 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 MTMR2Q13614 643 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 FMR1NBQ8N0W7 255 aaPredicted RBP20.16■□□□□ 0.82
PKD2-201ENST00000237596 RNF10Q8N5U6 811 aaKnown RBP20.16■□□□□ 0.82
PKD2-201ENST00000237596 UBN1Q9NPG3 1134 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 ANAPC7Q9UJX3 599 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 LRRC7Q96NW7 1537 aa20.16■□□□□ 0.82
PKD2-201ENST00000237596 LINC00116Q8NCU8 138 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 A0A1B0GUA9 196 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 SEPT6Q14141 434 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 TSGA10IPQ3SY00 556 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 RWDD4Q6NW29 188 aaKnown RBP20.15■□□□□ 0.82
PKD2-201ENST00000237596 PCGF5Q86SE9 256 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 RBM46Q8TBY0 533 aaKnown RBP20.15■□□□□ 0.82
PKD2-201ENST00000237596 DONSONQ9NYP3 566 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 CSF1RP07333 972 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 GPC3P51654 580 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 IQCB1Q15051 598 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 NCAPGQ9BPX3 1015 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 POLR3FQ9H1D9 316 aaPredicted RBP20.15■□□□□ 0.82
PKD2-201ENST00000237596 ZBTB12Q9Y330 459 aaPredicted RBP20.15■□□□□ 0.82
PKD2-201ENST00000237596 FLT1P17948 1338 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 TNPO2O14787 897 aaKnown RBP20.15■□□□□ 0.82
PKD2-201ENST00000237596 CCDC38Q502W7 563 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 SRBD1Q8N5C6 995 aaKnown RBP20.15■□□□□ 0.82
PKD2-201ENST00000237596 EIF2AK1Q9BQI3 630 aaKnown RBP20.15■□□□□ 0.82
PKD2-201ENST00000237596 ELP3Q9H9T3 547 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 BAG5Q9UL15 447 aa20.15■□□□□ 0.82
PKD2-201ENST00000237596 TSPY1Q01534 308 aa20.14■□□□□ 0.82
PKD2-201ENST00000237596 SLMAPQ14BN4 828 aa20.14■□□□□ 0.82
PKD2-201ENST00000237596 EPHA7Q15375 998 aa20.14■□□□□ 0.82
PKD2-201ENST00000237596 GDAP1Q8TB36 358 aa20.14■□□□□ 0.82
PKD2-201ENST00000237596 TEX13BQ9BXU2 312 aa20.14■□□□□ 0.82
PKD2-201ENST00000237596 MRPL4Q9BYD3 311 aaKnown RBP20.14■□□□□ 0.82
PKD2-201ENST00000237596 LMCD1Q9NZU5 365 aa20.14■□□□□ 0.82
PKD2-201ENST00000237596 MMEL1Q495T6 779 aa20.14■□□□□ 0.81
PKD2-201ENST00000237596 GUF1Q8N442 669 aaKnown RBP20.14■□□□□ 0.81
PKD2-201ENST00000237596 NUDCD1Q96RS6 583 aa20.14■□□□□ 0.81
PKD2-201ENST00000237596 GCOM2Q9BZD3 368 aaPredicted RBP20.14■□□□□ 0.81
PKD2-201ENST00000237596 ENTPD3O75355 529 aa20.14■□□□□ 0.81
PKD2-201ENST00000237596 VAMP7P51809 220 aa20.14■□□□□ 0.81
PKD2-201ENST00000237596 HSPH1Q92598 858 aa20.14■□□□□ 0.81
PKD2-201ENST00000237596 AP1M1Q9BXS5 423 aa20.14■□□□□ 0.81
PKD2-201ENST00000237596 ZRANB2O95218 330 aaKnown RBP eCLIP20.14■□□□□ 0.81
PKD2-201ENST00000237596 MT-ND3P03897 115 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms