RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 NCOR1O75376 2440 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 PTPRSQ13332 1948 aa12.64□□□□□ -0.39
SF3B6-201ENST00000233468 MYH7BA7E2Y1 1941 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 MBLAC1A4D2B0 266 aaPredicted RBP12.63□□□□□ -0.39
SF3B6-201ENST00000233468 C2orf72A6NCS6 295 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 POTEMA6NI47 508 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 M0QZ92 97 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 CKBP12277 381 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 THPOP40225 353 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 TECP42680 631 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 TOB1P50616 345 aaPredicted RBP12.63□□□□□ -0.39
SF3B6-201ENST00000233468 ADAM17P78536 824 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 PRKCEQ02156 737 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 PTGDRQ13258 359 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 PDIA5Q14554 519 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 IER5Q5VY09 327 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 ARL6IP4Q66PJ3 421 aaKnown RBP12.63□□□□□ -0.39
SF3B6-201ENST00000233468 POTEGQ6S5H5 508 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 LRRC8DQ7L1W4 858 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 RPAINQ86UA6 219 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 C4orf19Q8IY42 314 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 SYMPKQ92797 1274 aaKnown RBP12.63□□□□□ -0.39
SF3B6-201ENST00000233468 CCDC43Q96MW1 224 aaKnown RBP12.63□□□□□ -0.39
SF3B6-201ENST00000233468 TMEM60Q9H2L4 133 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
SF3B6-201ENST00000233468 DAXXQ9UER7 740 aaPredicted RBP12.63□□□□□ -0.39
SF3B6-201ENST00000233468 MSRAQ9UJ68 235 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 PCDHB6Q9Y5E3 794 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 PCDHA2Q9Y5H9 948 aa12.63□□□□□ -0.39
SF3B6-201ENST00000233468 PRRC2BQ5JSZ5 2229 aaKnown RBP12.63□□□□□ -0.39
SF3B6-201ENST00000233468 SMIM35A0A1B0GVV1 85 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 DDX11L8A8MPP1 907 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 RSPH10B2B2RC85 870 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 EML1O00423 815 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 IQCF3P0C7M6 154 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 RSPH10BP0C881 870 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 ACTN1P12814 892 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 MUTP22033 750 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 KLRC1P26715 233 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 DNM2P50570 870 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 ZNF200P98182 395 aaPredicted RBP12.62□□□□□ -0.39
SF3B6-201ENST00000233468 CDC42EP1Q00587 391 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 SPIRE1Q08AE8 756 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 MTHFD1LQ6UB35 978 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 FAM43BQ6ZT52 329 aaPredicted RBP12.62□□□□□ -0.39
SF3B6-201ENST00000233468 FERMT3Q86UX7 667 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 TPH2Q8IWU9 490 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 BANK1Q8NDB2 785 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 EIF2AK1Q9BQI3 630 aaKnown RBP12.62□□□□□ -0.39
SF3B6-201ENST00000233468 LXNQ9BS40 222 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 NIFKQ9BYG3 293 aaKnown RBP12.62□□□□□ -0.39
SF3B6-201ENST00000233468 TUFT1Q9NNX1 390 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 LRWD1Q9UFC0 647 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 SEPT9Q9UHD8 586 aaPredicted RBP12.62□□□□□ -0.39
SF3B6-201ENST00000233468 MTMR6Q9Y217 621 aa12.62□□□□□ -0.39
SF3B6-201ENST00000233468 RFXAPO00287 272 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 WNT7AO00755 349 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 LYPLA2O95372 231 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 XRCC6P12956 609 aaKnown RBP eCLIP12.61□□□□□ -0.39
SF3B6-201ENST00000233468 ATP4AP20648 1035 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 YWHABP31946 246 aaKnown RBP12.61□□□□□ -0.39
SF3B6-201ENST00000233468 ATP2C1P98194 919 aaPredicted RBP12.61□□□□□ -0.39
SF3B6-201ENST00000233468 TBC1D8BQ0IIM8 1120 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 RAB30Q15771 203 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 MARCH8Q5T0T0 291 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 KRT79Q5XKE5 535 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 TRMT1LQ7Z2T5 733 aaKnown RBP12.61□□□□□ -0.39
SF3B6-201ENST00000233468 DEFB128Q7Z7B8 93 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 C4orf32Q8N8J7 132 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 DYDC2Q96IM9 177 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 ZNF396Q96N95 335 aaPredicted RBP12.61□□□□□ -0.39
SF3B6-201ENST00000233468 CTAGE1Q96RT6 745 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 MAP7D2Q96T17 732 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 HSD17B14Q9BPX1 270 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 POLR3CQ9BUI4 534 aaPredicted RBP12.61□□□□□ -0.39
SF3B6-201ENST00000233468 FTOQ9C0B1 505 aaKnown RBP eCLIP12.61□□□□□ -0.39
SF3B6-201ENST00000233468 SLC28A3Q9HAS3 691 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 SLC4A7Q9Y6M7 1214 aa12.61□□□□□ -0.39
SF3B6-201ENST00000233468 TANC1Q9C0D5 1861 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 ZBBXA8MT70 800 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 TNFRSF10AO00220 468 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 GAS2O43903 313 aaKnown RBP12.6□□□□□ -0.39
SF3B6-201ENST00000233468 ZNF862O60290 1169 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 EFCAB14O75071 495 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 SLITRK3O94933 977 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 HOXB3P14651 431 aaPredicted RBP12.6□□□□□ -0.39
SF3B6-201ENST00000233468 RFC5P40937 340 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 RESTQ13127 1097 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 HIC1Q14526 733 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 NBR1Q14596 966 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 UGCGQ16739 394 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 TRIM71Q2Q1W2 868 aaKnown RBP12.6□□□□□ -0.39
SF3B6-201ENST00000233468 ODR4Q5SWX8 454 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 ZNF618Q5T7W0 954 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 MICALL1Q8N3F8 863 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 KCTD17Q8N5Z5 321 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 METTL13Q8N6R0 699 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 SPRYD3Q8NCJ5 442 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 SLC7A3Q8WY07 619 aa12.6□□□□□ -0.39
SF3B6-201ENST00000233468 DHX38Q92620 1227 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms