RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 MAPTP10636 758 aaKnown RBP18.48■□□□□ 0.55
GAPDH-201ENST00000229239 MAGEA1P43355 309 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 POLR2FP61218 127 aaKnown RBP18.48■□□□□ 0.55
GAPDH-201ENST00000229239 PRKG1Q13976 671 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 C10orf76Q5T2E6 689 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 MIER3Q7Z3K6 550 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 CCDC155Q8N6L0 562 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 ZSWIM4Q9H7M6 989 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 KCNH7Q9NS40 1196 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 DBR1Q9UK59 544 aaKnown RBP18.48■□□□□ 0.55
GAPDH-201ENST00000229239 CTDP1Q9Y5B0 961 aaPredicted RBP18.48■□□□□ 0.55
GAPDH-201ENST00000229239 PCDHB13Q9Y5F0 798 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 SMCHD1A6NHR9 2005 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 AKAP3O75969 853 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 ZSCAN20P17040 1043 aaPredicted RBP18.48■□□□□ 0.55
GAPDH-201ENST00000229239 VCAM1P19320 739 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 CC2D1AQ6P1N0 951 aaPredicted RBP18.48■□□□□ 0.55
GAPDH-201ENST00000229239 SAMD1Q6SPF0 538 aaPredicted RBP18.48■□□□□ 0.55
GAPDH-201ENST00000229239 HS2ST1Q7LGA3 356 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 ZNF720Q7Z2F6 126 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 ARMC9Q7Z3E5 817 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 SYTL5Q8TDW5 730 aaPredicted RBP18.48■□□□□ 0.55
GAPDH-201ENST00000229239 BEGAINQ9BUH8 593 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 TIPINQ9BVW5 301 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 AGO4Q9HCK5 861 aaKnown RBP18.48■□□□□ 0.55
GAPDH-201ENST00000229239 COL20A1Q9P218 1284 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 TSKSQ9UJT2 592 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 ZNF112Q9UJU3 913 aa18.48■□□□□ 0.55
GAPDH-201ENST00000229239 PAPPA2Q9BXP8 1791 aa18.47■□□□□ 0.55
GAPDH-201ENST00000229239 TGFB1I1O43294 461 aa18.47■□□□□ 0.55
GAPDH-201ENST00000229239 FLOT1O75955 427 aa18.47■□□□□ 0.55
GAPDH-201ENST00000229239 ATP1A1P05023 1023 aaKnown RBP18.47■□□□□ 0.55
GAPDH-201ENST00000229239 ALAS1P13196 640 aa18.47■□□□□ 0.55
GAPDH-201ENST00000229239 PSMC2P35998 433 aaKnown RBP18.47■□□□□ 0.55
GAPDH-201ENST00000229239 GABPB1Q06547 395 aaPredicted RBP18.47■□□□□ 0.55
GAPDH-201ENST00000229239 TKFCQ3LXA3 575 aa18.47■□□□□ 0.55
GAPDH-201ENST00000229239 NBPF12Q5TAG4 269 aaPredicted RBP18.47■□□□□ 0.55
GAPDH-201ENST00000229239 FAM178BQ8IXR5 827 aa18.47■□□□□ 0.55
GAPDH-201ENST00000229239 SCYL3Q8IZE3 742 aa18.47■□□□□ 0.55
GAPDH-201ENST00000229239 ZIC5Q96T25 663 aa18.47■□□□□ 0.55
GAPDH-201ENST00000229239 NLRC4Q9NPP4 1024 aa18.47■□□□□ 0.55
GAPDH-201ENST00000229239 FHOD1Q9Y613 1164 aa18.47■□□□□ 0.55
GAPDH-201ENST00000229239 DHX15O43143 795 aaKnown RBP18.46■□□□□ 0.55
GAPDH-201ENST00000229239 SLC10A3P09131 477 aa18.46■□□□□ 0.55
GAPDH-201ENST00000229239 ERCC3P19447 782 aa18.46■□□□□ 0.55
GAPDH-201ENST00000229239 OAZ1P54368 228 aa18.46■□□□□ 0.55
GAPDH-201ENST00000229239 ASIC2Q16515 512 aa18.46■□□□□ 0.55
GAPDH-201ENST00000229239 EXOC3L4Q17RC7 722 aa18.46■□□□□ 0.55
GAPDH-201ENST00000229239 TDRD12Q587J7 1177 aaKnown RBP18.46■□□□□ 0.55
GAPDH-201ENST00000229239 GBP6Q6ZN66 633 aa18.46■□□□□ 0.55
GAPDH-201ENST00000229239 TMEM174Q8WUU8 243 aa18.46■□□□□ 0.55
GAPDH-201ENST00000229239 FIZ1Q96SL8 496 aa18.46■□□□□ 0.55
GAPDH-201ENST00000229239 RAVER2Q9HCJ3 691 aaKnown RBP18.46■□□□□ 0.55
GAPDH-201ENST00000229239 ATP8B3O60423 1300 aa18.46■□□□□ 0.55
GAPDH-201ENST00000229239 ZMYM2Q9UBW7 1377 aa18.46■□□□□ 0.55
GAPDH-201ENST00000229239 TLR2O60603 784 aa18.46■□□□□ 0.54
GAPDH-201ENST00000229239 PNMA6AP0CW24 399 aaPredicted RBP18.46■□□□□ 0.54
GAPDH-201ENST00000229239 ITIH3Q06033 890 aa18.46■□□□□ 0.54
GAPDH-201ENST00000229239 MTMR1Q13613 665 aa18.46■□□□□ 0.54
GAPDH-201ENST00000229239 MTMR2Q13614 643 aa18.46■□□□□ 0.54
GAPDH-201ENST00000229239 SLC9A9Q8IVB4 645 aa18.46■□□□□ 0.54
GAPDH-201ENST00000229239 MSL3Q8N5Y2 521 aaKnown RBP18.46■□□□□ 0.54
GAPDH-201ENST00000229239 SLC35C1Q96A29 364 aa18.46■□□□□ 0.54
GAPDH-201ENST00000229239 BORCS6Q96GS4 357 aa18.46■□□□□ 0.54
GAPDH-201ENST00000229239 C12orf42Q96LP6 360 aa18.46■□□□□ 0.54
GAPDH-201ENST00000229239 RPAP3Q9H6T3 665 aaPredicted RBP18.46■□□□□ 0.54
GAPDH-201ENST00000229239 ANKZF1Q9H8Y5 726 aa18.46■□□□□ 0.54
GAPDH-201ENST00000229239 WRAP73Q9P2S5 460 aaPredicted RBP18.46■□□□□ 0.54
GAPDH-201ENST00000229239 FZD1Q9UP38 647 aa18.46■□□□□ 0.54
GAPDH-201ENST00000229239 MACROD2A1Z1Q3 448 aa18.45■□□□□ 0.54
GAPDH-201ENST00000229239 CTCFP49711 727 aaPredicted RBP18.45■□□□□ 0.54
GAPDH-201ENST00000229239 BACE1P56817 501 aa18.45■□□□□ 0.54
GAPDH-201ENST00000229239 SNRPFP62306 86 aaKnown RBP18.45■□□□□ 0.54
GAPDH-201ENST00000229239 SLC18A3Q16572 532 aa18.45■□□□□ 0.54
GAPDH-201ENST00000229239 ODR4Q5SWX8 454 aa18.45■□□□□ 0.54
GAPDH-201ENST00000229239 KLHDC7AQ5VTJ3 777 aa18.45■□□□□ 0.54
GAPDH-201ENST00000229239 CPXCR1Q8N123 301 aa18.45■□□□□ 0.54
GAPDH-201ENST00000229239 SLC17A8Q8NDX2 589 aa18.45■□□□□ 0.54
GAPDH-201ENST00000229239 CRACR2AQ9BSW2 395 aa18.45■□□□□ 0.54
GAPDH-201ENST00000229239 STRA6Q9BX79 667 aa18.45■□□□□ 0.54
GAPDH-201ENST00000229239 TFR2Q9UP52 801 aa18.45■□□□□ 0.54
GAPDH-201ENST00000229239 DOCK1Q14185 1865 aa18.45■□□□□ 0.54
GAPDH-201ENST00000229239 TCP1P17987 556 aaKnown RBP18.44■□□□□ 0.54
GAPDH-201ENST00000229239 NMT1P30419 496 aaKnown RBP18.44■□□□□ 0.54
GAPDH-201ENST00000229239 QARSP47897 775 aaKnown RBP18.44■□□□□ 0.54
GAPDH-201ENST00000229239 JAK3P52333 1124 aa18.44■□□□□ 0.54
GAPDH-201ENST00000229239 KLHL30Q0D2K2 578 aa18.44■□□□□ 0.54
GAPDH-201ENST00000229239 RAPGEF1Q13905 1077 aa18.44■□□□□ 0.54
GAPDH-201ENST00000229239 PPP2R5AQ15172 486 aa18.44■□□□□ 0.54
GAPDH-201ENST00000229239 LDLRAD1Q5T700 205 aa18.44■□□□□ 0.54
GAPDH-201ENST00000229239 DPY19L2P1Q6NXN4 242 aa18.44■□□□□ 0.54
GAPDH-201ENST00000229239 RASAL3Q86YV0 1011 aa18.44■□□□□ 0.54
GAPDH-201ENST00000229239 FAM186BQ8IYM0 893 aa18.44■□□□□ 0.54
GAPDH-201ENST00000229239 RDM1Q8NG50 284 aa18.44■□□□□ 0.54
GAPDH-201ENST00000229239 NOX5Q96PH1 765 aa18.44■□□□□ 0.54
GAPDH-201ENST00000229239 DMAC2Q9NW81 257 aa18.44■□□□□ 0.54
GAPDH-201ENST00000229239 LARSQ9P2J5 1176 aaKnown RBP18.44■□□□□ 0.54
GAPDH-201ENST00000229239 TARSL2A2RTX5 802 aaKnown RBP18.43■□□□□ 0.54
GAPDH-201ENST00000229239 SFI1A8K8P3 1242 aa18.43■□□□□ 0.54
GAPDH-201ENST00000229239 C19orf81C9J6K1 198 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms