RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 FRMD5Q7Z6J6 570 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 TTYH3Q9C0H2 523 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 TRMT1Q9NXH9 659 aaKnown RBP16.38■□□□□ 0.21
CCDC47-201ENST00000225726 FAM184BQ9ULE4 1060 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 TELO2Q9Y4R8 837 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 TTC26A0AVF1 554 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 TGFB1I1O43294 461 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 NPEPPSP55786 919 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 KCNA1Q09470 495 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 NEDD9Q14511 834 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 LUC7L2Q9Y383 392 aaKnown RBP16.38■□□□□ 0.21
CCDC47-201ENST00000225726 SYNGAP1Q96PV0 1343 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 ZNFX1Q9P2E3 1918 aaKnown RBP16.38■□□□□ 0.21
CCDC47-201ENST00000225726 K7ENM7 598 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 RNF225M0QZC1 329 aaPredicted RBP16.38■□□□□ 0.21
CCDC47-201ENST00000225726 SOCS7O14512 581 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 KRT9P35527 623 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 GCLCP48506 637 aaPredicted RBP16.38■□□□□ 0.21
CCDC47-201ENST00000225726 PRKCEQ02156 737 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 MKRN3Q13064 507 aaKnown RBP16.38■□□□□ 0.21
CCDC47-201ENST00000225726 WDR78Q5VTH9 848 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 KCNV1Q6PIU1 500 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 MAEAQ7L5Y9 396 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 SLC17A8Q8NDX2 589 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 MORC4Q8TE76 937 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 PPP1R13BQ96KQ4 1090 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 PCMTD1Q96MG8 357 aaPredicted RBP16.38■□□□□ 0.21
CCDC47-201ENST00000225726 SIK3Q9Y2K2 1263 aa16.38■□□□□ 0.21
CCDC47-201ENST00000225726 A0A1W2PQJ5 194 aa16.37■□□□□ 0.21
CCDC47-201ENST00000225726 SORBS3O60504 671 aa16.37■□□□□ 0.21
CCDC47-201ENST00000225726 C16orf45Q96MC5 204 aaPredicted RBP16.37■□□□□ 0.21
CCDC47-201ENST00000225726 RASSF10A6NK89 507 aa16.37■□□□□ 0.21
CCDC47-201ENST00000225726 PPP2R3AQ06190 1150 aa16.37■□□□□ 0.21
CCDC47-201ENST00000225726 NYAP1Q6ZVC0 841 aa16.37■□□□□ 0.21
CCDC47-201ENST00000225726 GOLGA5Q8TBA6 731 aa16.37■□□□□ 0.21
CCDC47-201ENST00000225726 CEP170P1Q96L14 293 aa16.37■□□□□ 0.21
CCDC47-201ENST00000225726 DNAJC7Q99615 494 aa16.37■□□□□ 0.21
CCDC47-201ENST00000225726 PORCNQ9H237 461 aa16.37■□□□□ 0.21
CCDC47-201ENST00000225726 ST6GALNAC4Q9H4F1 302 aa16.37■□□□□ 0.21
CCDC47-201ENST00000225726 R3HCC1Q9Y3T6 440 aaKnown RBP16.37■□□□□ 0.21
CCDC47-201ENST00000225726 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCDC47-201ENST00000225726 PLXNB2O15031 1838 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 FARP2O94887 1054 aaPredicted RBP16.36■□□□□ 0.21
CCDC47-201ENST00000225726 TRIM21P19474 475 aaKnown RBP16.36■□□□□ 0.21
CCDC47-201ENST00000225726 KLK7P49862 253 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 XKR3Q5GH77 459 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 TMTC1Q8IUR5 882 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 OR8K1Q8NGG5 319 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 SH2D3AQ9BRG2 576 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 ZNF302Q9NR11 478 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 MORF4L1Q9UBU8 362 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 ZSCAN12O43309 604 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 FAM102BQ5T8I3 360 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 HS2ST1Q7LGA3 356 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 EFCC1Q9HA90 598 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 METTL14Q9HCE5 456 aaKnown RBP16.36■□□□□ 0.21
CCDC47-201ENST00000225726 MAFBQ9Y5Q3 323 aaPredicted RBP16.36■□□□□ 0.21
CCDC47-201ENST00000225726 TRPM7Q96QT4 1865 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 IGKV6D-21A0A0A0MT36 114 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 EPB41P11171 864 aaKnown RBP16.36■□□□□ 0.21
CCDC47-201ENST00000225726 PTPN14Q15678 1187 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 GBP3Q9H0R5 595 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 PDCL3Q9H2J4 239 aa16.36■□□□□ 0.21
CCDC47-201ENST00000225726 ARMCX3Q9UH62 379 aaPredicted RBP16.36■□□□□ 0.21
CCDC47-201ENST00000225726 SEPT9Q9UHD8 586 aaPredicted RBP16.36■□□□□ 0.21
CCDC47-201ENST00000225726 MYH9P35579 1960 aaKnown RBP16.36■□□□□ 0.21
CCDC47-201ENST00000225726 TNNT1P13805 278 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 NCKAP1LP55160 1127 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 CYP26C1Q6V0L0 522 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 KSR1Q8IVT5 923 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 KIFAP3Q92845 792 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 ACCSQ96QU6 501 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 TMEM206Q9H813 350 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 NMRK2Q9NPI5 230 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 SOWAHDA6NJG2 315 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 ASB14A6NK59 587 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 CLIC2O15247 247 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 ZBED6P86452 979 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 TRMT1LQ7Z2T5 733 aaKnown RBP16.35■□□□□ 0.21
CCDC47-201ENST00000225726 ANKRD13CQ8N6S4 541 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 CYP26B1Q9NR63 512 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 PPP2R2CQ9Y2T4 447 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 KIF2AO00139 706 aaPredicted RBP16.35■□□□□ 0.21
CCDC47-201ENST00000225726 DGAT1O75907 488 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 TSR1Q2NL82 804 aaKnown RBP16.35■□□□□ 0.21
CCDC47-201ENST00000225726 METTL7BQ6UX53 244 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 MCPH1Q8NEM0 835 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 ZNF397Q8NF99 534 aaPredicted RBP16.35■□□□□ 0.21
CCDC47-201ENST00000225726 PARK7Q99497 189 aaKnown RBP16.35■□□□□ 0.21
CCDC47-201ENST00000225726 GPRC5CQ9NQ84 441 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 PDLIM7Q9NR12 457 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 AGPAT3Q9NRZ7 376 aa16.35■□□□□ 0.21
CCDC47-201ENST00000225726 SRCAPQ6ZRS2 3230 aa16.34■□□□□ 0.21
CCDC47-201ENST00000225726 GSTTP1A0A1W2PQM5 241 aa16.34■□□□□ 0.21
CCDC47-201ENST00000225726 AKAP3O75969 853 aa16.34■□□□□ 0.21
CCDC47-201ENST00000225726 CST9Q5W186 159 aa16.34■□□□□ 0.21
CCDC47-201ENST00000225726 TOGARAM2Q6ZUX3 1019 aa16.34■□□□□ 0.21
CCDC47-201ENST00000225726 EEPD1Q7L9B9 569 aa16.34■□□□□ 0.21
CCDC47-201ENST00000225726 SYCP3Q8IZU3 236 aa16.34■□□□□ 0.21
CCDC47-201ENST00000225726 MKNK1Q9BUB5 465 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms