RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ZBED6P86452 979 aa19.87■□□□□ 0.77
CLIP2-201ENST00000223398 PNMA8AQ86V59 439 aaPredicted RBP19.87■□□□□ 0.77
CLIP2-201ENST00000223398 C10orf67Q8IYJ2 551 aa19.87■□□□□ 0.77
CLIP2-201ENST00000223398 CFAP57Q96MR6 1250 aa19.87■□□□□ 0.77
CLIP2-201ENST00000223398 PLA2G12BQ9BX93 195 aa19.87■□□□□ 0.77
CLIP2-201ENST00000223398 MOSPD1Q9UJG1 213 aa19.87■□□□□ 0.77
CLIP2-201ENST00000223398 NDUFB10O96000 172 aa19.87■□□□□ 0.77
CLIP2-201ENST00000223398 AFG1LQ8WV93 481 aa19.87■□□□□ 0.77
CLIP2-201ENST00000223398 MTMR4Q9NYA4 1195 aa19.87■□□□□ 0.77
CLIP2-201ENST00000223398 HOMER3Q9NSC5 361 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 PNPLA7Q6ZV29 1317 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 THOC5Q13769 683 aaKnown RBP19.86■□□□□ 0.77
CLIP2-201ENST00000223398 SRBD1Q8N5C6 995 aaKnown RBP19.86■□□□□ 0.77
CLIP2-201ENST00000223398 DAAM1Q9Y4D1 1078 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 CIITAP33076 1130 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 ECEL1O95672 775 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 GUCY1A2P33402 732 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 MB21D1Q8N884 522 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 JPH1Q9HDC5 661 aaPredicted RBP19.86■□□□□ 0.77
CLIP2-201ENST00000223398 CDC42BPBQ9Y5S2 1711 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 CCL15-CCL14A0A0B4J2E2 113 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 KRT10P13645 584 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 CCL15Q16663 113 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 RABL6Q3YEC7 729 aaPredicted RBP19.86■□□□□ 0.77
CLIP2-201ENST00000223398 TTC30BQ8N4P2 665 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 TEX13BQ9BXU2 312 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 PCDHA13Q9Y5I0 950 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 PCDHA10Q9Y5I2 948 aa19.86■□□□□ 0.77
CLIP2-201ENST00000223398 SATB1Q01826 763 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 C2orf54Q08AI8 447 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 RNF219Q5W0B1 726 aaPredicted RBP19.85■□□□□ 0.77
CLIP2-201ENST00000223398 ZNF449Q6P9G9 518 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 DEFB129Q9H1M3 183 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 ZFYVE28Q9HCC9 887 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 EIF3CLB5ME19 914 aaKnown RBP19.85■□□□□ 0.77
CLIP2-201ENST00000223398 GGPS1O95749 300 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 ADORA2BP29275 332 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 STAT5BP51692 787 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 RNF149Q8NC42 400 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 EIF3CQ99613 913 aaKnown RBP19.85■□□□□ 0.77
CLIP2-201ENST00000223398 FAM217BQ9NTX9 383 aaPredicted RBP19.85■□□□□ 0.77
CLIP2-201ENST00000223398 RGL1Q9NZL6 768 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 ADAM22Q9P0K1 906 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 ABCA6Q8N139 1617 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 PPP1R2P3Q6NXS1 205 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 FAM117BQ6P1L5 589 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 NCAPGQ9BPX3 1015 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 C2orf40Q9H1Z8 148 aa19.85■□□□□ 0.77
CLIP2-201ENST00000223398 FDX1P10109 184 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 ALKBH5Q6P6C2 394 aaKnown RBP19.84■□□□□ 0.77
CLIP2-201ENST00000223398 PARK7Q99497 189 aaKnown RBP19.84■□□□□ 0.77
CLIP2-201ENST00000223398 MRPL4Q9BYD3 311 aaKnown RBP19.84■□□□□ 0.77
CLIP2-201ENST00000223398 FIS1Q9Y3D6 152 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 CROCC2H7BZ55 1655 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 PGRMC1O00264 195 aaKnown RBP19.84■□□□□ 0.77
CLIP2-201ENST00000223398 UPP2O95045 317 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 CPB1P15086 417 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 SSTR3P32745 418 aaPredicted RBP19.84■□□□□ 0.77
CLIP2-201ENST00000223398 COPB2P35606 906 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 SLC12A1Q13621 1099 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 PDCD6IPQ8WUM4 868 aaKnown RBP19.84■□□□□ 0.77
CLIP2-201ENST00000223398 CFAP36Q96G28 342 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 EPB41L5Q9HCM4 733 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 ARHGAP42A6NI28 874 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 TMEM62Q0P6H9 643 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 RBM46Q8TBY0 533 aaKnown RBP19.84■□□□□ 0.77
CLIP2-201ENST00000223398 PKNOX2Q96KN3 472 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 PIN4Q9Y237 131 aaKnown RBP19.84■□□□□ 0.77
CLIP2-201ENST00000223398 ZBED1O96006 694 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 BRD3Q15059 726 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 C10orf76Q5T2E6 689 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 STYK1Q6J9G0 422 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 WDR46O15213 610 aaKnown RBP19.84■□□□□ 0.77
CLIP2-201ENST00000223398 LMBRD2Q68DH5 695 aaPredicted RBP19.84■□□□□ 0.77
CLIP2-201ENST00000223398 AP1M1Q9BXS5 423 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 KIAA1586Q9HCI6 787 aa19.84■□□□□ 0.77
CLIP2-201ENST00000223398 PRR29P0C7W0 189 aa19.83■□□□□ 0.77
CLIP2-201ENST00000223398 KCTD16Q68DU8 428 aa19.83■□□□□ 0.77
CLIP2-201ENST00000223398 ALKBH8Q96BT7 664 aaKnown RBP19.83■□□□□ 0.77
CLIP2-201ENST00000223398 CAMSAP1Q5T5Y3 1602 aa19.83■□□□□ 0.77
CLIP2-201ENST00000223398 M0QYV0 167 aa19.83■□□□□ 0.77
CLIP2-201ENST00000223398 CEP55Q53EZ4 464 aa19.83■□□□□ 0.77
CLIP2-201ENST00000223398 EFCAB13Q8IY85 973 aa19.83■□□□□ 0.77
CLIP2-201ENST00000223398 NEK9Q8TD19 979 aa19.83■□□□□ 0.77
CLIP2-201ENST00000223398 KIF12Q96FN5 646 aa19.83■□□□□ 0.77
CLIP2-201ENST00000223398 USP42Q9H9J4 1324 aaKnown RBP19.83■□□□□ 0.77
CLIP2-201ENST00000223398 PRCPP42785 496 aa19.83■□□□□ 0.76
CLIP2-201ENST00000223398 IQCB1Q15051 598 aa19.83■□□□□ 0.76
CLIP2-201ENST00000223398 SH2D4BQ5SQS7 431 aa19.83■□□□□ 0.76
CLIP2-201ENST00000223398 TMTC4Q5T4D3 741 aa19.83■□□□□ 0.76
CLIP2-201ENST00000223398 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.83■□□□□ 0.76
CLIP2-201ENST00000223398 NUF2Q9BZD4 464 aa19.83■□□□□ 0.76
CLIP2-201ENST00000223398 UNC13BO14795 1591 aa19.83■□□□□ 0.76
CLIP2-201ENST00000223398 HIP1RO75146 1068 aa19.83■□□□□ 0.76
CLIP2-201ENST00000223398 JADE1Q6IE81 842 aa19.83■□□□□ 0.76
CLIP2-201ENST00000223398 DNAJC17Q9NVM6 304 aaKnown RBP19.83■□□□□ 0.76
CLIP2-201ENST00000223398 ATP8A1Q9Y2Q0 1164 aa19.83■□□□□ 0.76
CLIP2-201ENST00000223398 KBTBD13C9JR72 458 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 GNGT1P63211 74 aa19.82■□□□□ 0.76
CLIP2-201ENST00000223398 COL23A1Q86Y22 540 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms