RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 DYDC2Q96IM9 177 aa14.33□□□□□ -0.12
PLOD3-201ENST00000223127 ZIM3Q96PE6 472 aa14.33□□□□□ -0.12
PLOD3-201ENST00000223127 TAAR1Q96RJ0 339 aa14.33□□□□□ -0.12
PLOD3-201ENST00000223127 SYT17Q9BSW7 474 aa14.33□□□□□ -0.12
PLOD3-201ENST00000223127 WDR11Q9BZH6 1224 aa14.33□□□□□ -0.12
PLOD3-201ENST00000223127 TSGA10Q9BZW7 698 aa14.33□□□□□ -0.12
PLOD3-201ENST00000223127 CXorf56Q9H5V9 222 aa14.33□□□□□ -0.12
PLOD3-201ENST00000223127 GINM1Q9NU53 330 aa14.33□□□□□ -0.12
PLOD3-201ENST00000223127 ZNHIT6Q9NWK9 470 aaKnown RBP14.33□□□□□ -0.12
PLOD3-201ENST00000223127 ADM5C9JUS6 153 aa14.32□□□□□ -0.12
PLOD3-201ENST00000223127 IPO5O00410 1097 aaKnown RBP14.32□□□□□ -0.12
PLOD3-201ENST00000223127 PLEKP08567 350 aaPredicted RBP14.32□□□□□ -0.12
PLOD3-201ENST00000223127 MYCLP12524 364 aaPredicted RBP14.32□□□□□ -0.12
PLOD3-201ENST00000223127 CENPPQ6IPU0 288 aa14.32□□□□□ -0.12
PLOD3-201ENST00000223127 TRMT1LQ7Z2T5 733 aaKnown RBP14.32□□□□□ -0.12
PLOD3-201ENST00000223127 MCF2L2Q86YR7 1114 aa14.32□□□□□ -0.12
PLOD3-201ENST00000223127 TRIM58Q8NG06 486 aa14.32□□□□□ -0.12
PLOD3-201ENST00000223127 RUFY1Q96T51 708 aa14.32□□□□□ -0.12
PLOD3-201ENST00000223127 BCAS3Q9H6U6 928 aa14.32□□□□□ -0.12
PLOD3-201ENST00000223127 HSF2BPO75031 334 aa14.32□□□□□ -0.12
PLOD3-201ENST00000223127 TNFRSF8P28908 595 aa14.32□□□□□ -0.12
PLOD3-201ENST00000223127 MATR3P43243 847 aaKnown RBP eCLIP14.32□□□□□ -0.12
PLOD3-201ENST00000223127 EHHADHQ08426 723 aa14.32□□□□□ -0.12
PLOD3-201ENST00000223127 MYOCDQ8IZQ8 938 aa14.32□□□□□ -0.12
PLOD3-201ENST00000223127 GUF1Q8N442 669 aaKnown RBP14.32□□□□□ -0.12
PLOD3-201ENST00000223127 SYTL5Q8TDW5 730 aaPredicted RBP14.32□□□□□ -0.12
PLOD3-201ENST00000223127 OSBPL9Q96SU4 736 aa14.32□□□□□ -0.12
PLOD3-201ENST00000223127 STIM2Q9P246 746 aa14.32□□□□□ -0.12
PLOD3-201ENST00000223127 RSPH10B2B2RC85 870 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 FSBPO95073 299 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 MOCS3O95396 460 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 RSPH10BP0C881 870 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 YBX3P16989 372 aaKnown RBP eCLIP14.31□□□□□ -0.122e-6■■■□□ 14.8
PLOD3-201ENST00000223127 ATP1A2P50993 1020 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 PLS1Q14651 629 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 SUPT20HL1Q3ZLR7 823 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 ALS2CLQ60I27 953 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 SLC5A5Q92911 643 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 PSMB7Q99436 277 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 REEP2Q9BRK0 252 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 MXRA8Q9BRK3 442 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 UNC45AQ9H3U1 944 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 KCNH7Q9NS40 1196 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 RABGAP1Q9Y3P9 1069 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 SFI1A8K8P3 1242 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 SLITRK3O94933 977 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 MAP2K2P36507 400 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 PPP1R2P41236 205 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 NOC4LQ9BVI4 516 aaKnown RBP14.31□□□□□ -0.12
PLOD3-201ENST00000223127 NUP58Q9BVL2 599 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 RUSC1Q9BVN2 902 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 MEFVO15553 781 aaPredicted RBP14.31□□□□□ -0.12
PLOD3-201ENST00000223127 TACC1O75410 805 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 KRT14P02533 472 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 CHRM1P11229 460 aaPredicted RBP14.31□□□□□ -0.12
PLOD3-201ENST00000223127 CXCR5P32302 372 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 PSMD2Q13200 908 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 KCTD16Q68DU8 428 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 SNRNP48Q6IEG0 339 aaKnown RBP14.31□□□□□ -0.12
PLOD3-201ENST00000223127 RNF207Q6ZRF8 634 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 B4GALNT4Q76KP1 1039 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 SYT2Q8N9I0 419 aaPredicted RBP14.31□□□□□ -0.12
PLOD3-201ENST00000223127 RETREG2Q8NC44 543 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 NOC3LQ8WTT2 800 aaKnown RBP14.31□□□□□ -0.12
PLOD3-201ENST00000223127 CABS1Q96KC9 395 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 PCMTD1Q96MG8 357 aaPredicted RBP14.31□□□□□ -0.12
PLOD3-201ENST00000223127 HSD17B14Q9BPX1 270 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 RNF146Q9NTX7 359 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 HYOU1Q9Y4L1 999 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 SSC5DA1L4H1 1573 aa14.31□□□□□ -0.12
PLOD3-201ENST00000223127 ZEB2O60315 1214 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 PEX10O60683 326 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 USP2O75604 605 aaPredicted RBP14.3□□□□□ -0.12
PLOD3-201ENST00000223127 CDK17Q00537 523 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 GIT2Q14161 759 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 FKBP15Q5T1M5 1219 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 C9orf131Q5VYM1 1079 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 BANK1Q8NDB2 785 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 RMDN3Q96TC7 470 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 TMOD4Q9NZQ9 345 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 WRAP73Q9P2S5 460 aaPredicted RBP14.3□□□□□ -0.12
PLOD3-201ENST00000223127 KIAA0754O94854 1291 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 PRLRP16471 622 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 CASP5P51878 434 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 MRPS9P82933 396 aaKnown RBP14.3□□□□□ -0.12
PLOD3-201ENST00000223127 TBC1D8BQ0IIM8 1120 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 PPP2R5CQ13362 524 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 BAATQ14032 418 aaPredicted RBP14.3□□□□□ -0.12
PLOD3-201ENST00000223127 VGLL4Q14135 290 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 MIIPQ5JXC2 388 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 KDM7AQ6ZMT4 941 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 FAM114A1Q8IWE2 563 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 SULF1Q8IWU6 871 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 DCPSQ96C86 337 aaKnown RBP14.3□□□□□ -0.12
PLOD3-201ENST00000223127 RNPC3Q96LT9 517 aaKnown RBP14.3□□□□□ -0.12
PLOD3-201ENST00000223127 PAGR1Q9BTK6 254 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 POLR3CQ9BUI4 534 aaPredicted RBP14.3□□□□□ -0.12
PLOD3-201ENST00000223127 TEKT3Q9BXF9 490 aa14.3□□□□□ -0.12
PLOD3-201ENST00000223127 IFIH1Q9BYX4 1025 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms