RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 SHANK3Q9BYB0 1731 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 DDX3XO00571 662 aaKnown RBP eCLIP12.14□□□□□ -0.47
NEFM-201ENST00000221166 PDXKO00764 312 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 CTNND1O60716 968 aaKnown RBP12.14□□□□□ -0.47
NEFM-201ENST00000221166 CCDC172P0C7W6 258 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 TNFRSF8P28908 595 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 SLC12A3P55017 1021 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 PPP2R2AP63151 447 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 DR1Q01658 176 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 ACTN3Q08043 901 aaPredicted RBP12.14□□□□□ -0.47
NEFM-201ENST00000221166 COG2Q14746 738 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 ZFYVE27Q5T4F4 411 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 PIK3R5Q8WYR1 880 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 DYDC2Q96IM9 177 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 RAB17Q9H0T7 212 aa12.14□□□□□ -0.47
NEFM-201ENST00000221166 F5H6K3 240 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 PPEF1O14829 653 aaPredicted RBP12.13□□□□□ -0.47
NEFM-201ENST00000221166 IL1R1P14778 569 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 KLRC3Q07444 240 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 DENND2CQ68D51 928 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 SPATS2Q86XZ4 545 aaKnown RBP12.13□□□□□ -0.47
NEFM-201ENST00000221166 FAM114A2Q9NRY5 505 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 AJAP1Q9UKB5 411 aaPredicted RBP12.13□□□□□ -0.47
NEFM-201ENST00000221166 ZNF844Q08AG5 666 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 GKAP1Q5VSY0 366 aaPredicted RBP12.13□□□□□ -0.47
NEFM-201ENST00000221166 LRCH2Q5VUJ6 765 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 PLCB1Q9NQ66 1216 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 RASAL2Q9UJF2 1139 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 RGS16O15492 202 aaPredicted RBP12.13□□□□□ -0.47
NEFM-201ENST00000221166 SPOPO43791 374 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 GAS7O60861 476 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 FAM107AO95990 144 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 LMNB1P20700 586 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 CETN1Q12798 172 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 ITGB3BPQ13352 177 aaPredicted RBP12.13□□□□□ -0.47
NEFM-201ENST00000221166 MEX3CQ5U5Q3 659 aaKnown RBP12.13□□□□□ -0.47
NEFM-201ENST00000221166 STXBP4Q6ZWJ1 553 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 CCDC105Q8IYK2 499 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 SYT2Q8N9I0 419 aaPredicted RBP12.13□□□□□ -0.47
NEFM-201ENST00000221166 GIMAP7Q8NHV1 300 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 SH2D3AQ9BRG2 576 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 UBE2TQ9NPD8 197 aaPredicted RBP12.13□□□□□ -0.47
NEFM-201ENST00000221166 PNMA2Q9UL42 364 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 PCDHAC2Q9Y5I4 1007 aa12.13□□□□□ -0.47
NEFM-201ENST00000221166 FAM86B1E9PN63 330 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 FAM86B2P0C5J1 330 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 GUCY2CP25092 1073 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 RPA1P27694 616 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 CCDC91Q7Z6B0 441 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 PPP1R9AQ9ULJ8 1098 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 ARHGEF35A5YM69 484 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 SOX5P35711 763 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 SSR1P43307 286 aaKnown RBP12.12□□□□□ -0.47
NEFM-201ENST00000221166 MYL7Q01449 175 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 EPHA7Q15375 998 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 ACTRT1Q8TDG2 376 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 SLC35C1Q96A29 364 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 DCDC2CA8MYV0 355 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 MSH4O15457 936 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 ABCB5Q2M3G0 1257 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 AADACL2Q6P093 401 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 ARHGAP27Q6ZUM4 889 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 NAP1L3Q99457 506 aaPredicted RBP12.12□□□□□ -0.47
NEFM-201ENST00000221166 PITPNM2Q9BZ72 1349 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 PARVGQ9HBI0 331 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 CD248Q9HCU0 757 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 NR2E1Q9Y466 385 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 PCDHA2Q9Y5H9 948 aa12.12□□□□□ -0.47
NEFM-201ENST00000221166 EML1O00423 815 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 HOXA7P31268 230 aaPredicted RBP12.11□□□□□ -0.47
NEFM-201ENST00000221166 E2F5Q15329 346 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 SYDE2Q5VT97 1194 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 HOOK3Q86VS8 718 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 CERS5Q8N5B7 392 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 SCFD2Q8WU76 684 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 RAPGEF5Q92565 580 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 PSMD1Q99460 953 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 DNAJC17Q9NVM6 304 aaKnown RBP12.11□□□□□ -0.47
NEFM-201ENST00000221166 BIRC3Q13489 604 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 PPP1R7Q15435 360 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 PHLDB2Q86SQ0 1253 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
NEFM-201ENST00000221166 THAP2Q9H0W7 228 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 KCNK9Q9NPC2 374 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 MTRF1LQ9UGC7 380 aaKnown RBP12.11□□□□□ -0.47
NEFM-201ENST00000221166 GH2P01242 217 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 MAP2K2P36507 400 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 CRKP46108 304 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 UAP1Q16222 522 aaPredicted RBP12.11□□□□□ -0.47
NEFM-201ENST00000221166 CCDC38Q502W7 563 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 SEL1L2Q5TEA6 688 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 LRIG3Q6UXM1 1119 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 NT5DC3Q86UY8 548 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 MREGQ8N565 214 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 UBL4BQ8N7F7 174 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 COA1Q9GZY4 146 aa12.11□□□□□ -0.47
NEFM-201ENST00000221166 INTS2Q9H0H0 1204 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms