RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 RFC5P40937 340 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 SOX10P56693 466 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 EMC2Q15006 297 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 MTHFD1LQ6UB35 978 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 SLC43A3Q8NBI5 491 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 ATP6V0A4Q9HBG4 840 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 PPME1Q9Y570 386 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 CCDC85CA6NKD9 419 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 TREHO43280 583 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 GNAT1P11488 350 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 ARSHQ5FYA8 562 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 C1orf186Q6ZWK4 172 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 NECAB2Q7Z6G3 386 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 LRRC71Q8N4P6 559 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 METTL13Q8N6R0 699 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 DHX33Q9H6R0 707 aaKnown RBP30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 SUGCTQ9HAC7 445 aa30.29■■■□□ 2.44
CHMP4B-201ENST00000217402 DNAH12Q6ZR08 3092 aa30.28■■■□□ 2.44
CHMP4B-201ENST00000217402 MYMKA6NI61 221 aa30.28■■■□□ 2.44
CHMP4B-201ENST00000217402 MAFO75444 373 aaPredicted RBP30.28■■■□□ 2.44
CHMP4B-201ENST00000217402 KRT18P05783 430 aaKnown RBP30.28■■■□□ 2.44
CHMP4B-201ENST00000217402 CASP1P29466 404 aa30.28■■■□□ 2.44
CHMP4B-201ENST00000217402 CACNB1Q02641 598 aaPredicted RBP30.28■■■□□ 2.44
CHMP4B-201ENST00000217402 TIGD1Q96MW7 591 aa30.28■■■□□ 2.44
CHMP4B-201ENST00000217402 POLD4Q9HCU8 107 aa30.28■■■□□ 2.44
CHMP4B-201ENST00000217402 XPNPEP1Q9NQW7 623 aa30.28■■■□□ 2.44
CHMP4B-201ENST00000217402 TRMT13Q9NUP7 481 aaKnown RBP30.28■■■□□ 2.44
CHMP4B-201ENST00000217402 ADAM17P78536 824 aa30.27■■■□□ 2.44
CHMP4B-201ENST00000217402 PTPN11Q06124 597 aaPredicted RBP30.27■■■□□ 2.44
CHMP4B-201ENST00000217402 SLC39A5Q6ZMH5 540 aa30.27■■■□□ 2.44
CHMP4B-201ENST00000217402 DYMQ7RTS9 669 aa30.27■■■□□ 2.44
CHMP4B-201ENST00000217402 BLZF1Q9H2G9 400 aa30.27■■■□□ 2.44
CHMP4B-201ENST00000217402 MBLAC1A4D2B0 266 aaPredicted RBP30.26■■■□□ 2.44
CHMP4B-201ENST00000217402 AMPD3Q01432 767 aa30.26■■■□□ 2.44
CHMP4B-201ENST00000217402 PTGISQ16647 500 aa30.26■■■□□ 2.44
CHMP4B-201ENST00000217402 DDX12PQ92771 950 aa30.26■■■□□ 2.44
CHMP4B-201ENST00000217402 GPRC5CQ9NQ84 441 aa30.26■■■□□ 2.44
CHMP4B-201ENST00000217402 MAGEB2O15479 319 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 PRR29P0C7W0 189 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 CLCN3P51790 818 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 FAM102BQ5T8I3 360 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 EFCAB12Q6NXP0 572 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 KANK3Q6NY19 840 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 RUFY4Q6ZNE9 571 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 SH3RF1Q7Z6J0 888 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 RETREG2Q8NC44 543 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 TMEM143Q96AN5 459 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 CCDC34Q96HJ3 373 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 REEP2Q9BRK0 252 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 PDLIM7Q9NR12 457 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 KCND2Q9NZV8 630 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 NOD1Q9Y239 953 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 KAT6AQ92794 2004 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 CYP2C9P11712 490 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 CDK7P50613 346 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 DRP2Q13474 957 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 CAMK4Q16566 473 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 MCPH1Q8NEM0 835 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 JPH2Q9BR39 696 aaPredicted RBP30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 TRIM9Q9C026 710 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 LRRC27Q9C0I9 530 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 TRPV6Q9H1D0 765 aa30.25■■■□□ 2.43
CHMP4B-201ENST00000217402 IGKV6-21A0A0C4DH24 114 aa30.24■■■□□ 2.43
CHMP4B-201ENST00000217402 B4GALT4O60513 344 aa30.24■■■□□ 2.43
CHMP4B-201ENST00000217402 PQBP1O60828 265 aaKnown RBP30.24■■■□□ 2.43
CHMP4B-201ENST00000217402 GUCY2CP25092 1073 aa30.24■■■□□ 2.43
CHMP4B-201ENST00000217402 CUL4BQ13620 913 aa30.24■■■□□ 2.43
CHMP4B-201ENST00000217402 EXOC8Q8IYI6 725 aa30.24■■■□□ 2.43
CHMP4B-201ENST00000217402 FAM49AQ9H0Q0 323 aaPredicted RBP30.24■■■□□ 2.43
CHMP4B-201ENST00000217402 PCDHA2Q9Y5H9 948 aa30.24■■■□□ 2.43
CHMP4B-201ENST00000217402 HIP1RO75146 1068 aa30.23■■■□□ 2.43
CHMP4B-201ENST00000217402 PNOCQ13519 176 aa30.23■■■□□ 2.43
CHMP4B-201ENST00000217402 POSTNQ15063 836 aa30.23■■■□□ 2.43
CHMP4B-201ENST00000217402 CTAGE1Q96RT6 745 aa30.23■■■□□ 2.43
CHMP4B-201ENST00000217402 SEZ6LQ9BYH1 1024 aa30.23■■■□□ 2.43
CHMP4B-201ENST00000217402 RSPH10B2B2RC85 870 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 RSPH10BP0C881 870 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 ASIC1P78348 528 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 MKRN4PQ13434 485 aaPredicted RBP30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 GIT2Q14161 759 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 TRIM60Q495X7 471 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 UBE2Q1Q7Z7E8 422 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 ERCC4Q92889 916 aaPredicted RBP30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 C7orf25Q9BPX7 421 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 POLR3FQ9H1D9 316 aaPredicted RBP30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 CLSTN2Q9H4D0 955 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 GTPBP6O43824 516 aaPredicted RBP30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 SNX17Q15036 470 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 FAM126BQ8IXS8 530 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 LINC01465Q8N7H1 131 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 DNAJC19Q96DA6 116 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 NUP62CLQ9H1M0 184 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 ZHX3Q9H4I2 956 aa30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 HOOK1Q9UJC3 728 aaKnown RBP30.22■■■□□ 2.43
CHMP4B-201ENST00000217402 TRIP12Q14669 1992 aaPredicted RBP30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 MROH7Q68CQ1 1323 aa30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 GAS2O43903 313 aaKnown RBP30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 TBCAO75347 108 aaKnown RBP30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 IDEP14735 1019 aa30.21■■■□□ 2.43
CHMP4B-201ENST00000217402 TMOD1P28289 359 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms