RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 HOOK3Q86VS8 718 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 PRMT6Q96LA8 375 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 ACCSQ96QU6 501 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 VIPAS39Q9H9C1 493 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 RAVER2Q9HCJ3 691 aaKnown RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 ZNF277Q9NRM2 450 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 DNAJC17Q9NVM6 304 aaKnown RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 TRPM3Q9HCF6 1732 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 RAD51CO43502 376 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 GBP2P32456 591 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 CASP5P51878 434 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 IRX5P78411 483 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 AMPD2Q01433 879 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 KCNA1Q09470 495 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 DMP1Q13316 513 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 TRIM59Q8IWR1 403 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 ANKS4BQ8N8V4 417 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 CEP170P1Q96L14 293 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 FGFBP2Q9BYJ0 223 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 PICK1Q9NRD5 415 aa10.58□□□□□ -0.72
CSTF1-201ENST00000217109 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.58□□□□□ -0.72
CSTF1-201ENST00000217109 HIP1RO75146 1068 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 ECM2O94769 699 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-201ENST00000217109 PDE6CP51160 858 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 STRN3Q13033 797 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 LDHDQ86WU2 507 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 CREG2Q8IUH2 290 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 MMGT1Q8N4V1 131 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 GPATCH11Q8N954 259 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 SYT2Q8N9I0 419 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-201ENST00000217109 ZIM3Q96PE6 472 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 FMO2Q99518 471 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 TLR10Q9BXR5 811 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 BAZ2AQ9UIF9 1905 aaKnown RBP10.57□□□□□ -0.72
CSTF1-201ENST00000217109 FAM86B1E9PN63 330 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 ZNF263O14978 683 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 FAM86B2P0C5J1 330 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 COPB2P35606 906 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 ADCY1Q08828 1119 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 LRRC55Q6ZSA7 311 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 ANKRD42Q8N9B4 389 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 SAAL1Q96ER3 474 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 INTS2Q9H0H0 1204 aaKnown RBP10.57□□□□□ -0.72
CSTF1-201ENST00000217109 SAMD15Q9P1V8 674 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 NAGPAQ9UK23 515 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 EMSYQ7Z589 1322 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 FTLP02792 175 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-201ENST00000217109 GLI1P08151 1106 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 HOXA7P31268 230 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-201ENST00000217109 CDK17Q00537 523 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 DR1Q01658 176 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 TRIP13Q15645 432 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-201ENST00000217109 RINT1Q6NUQ1 792 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 MCF2L2Q86YR7 1114 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 IWS1Q96ST2 819 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.57□□□□□ -0.721e-7■■■□□ 14.9
CSTF1-201ENST00000217109 TAF1DQ9H5J8 278 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-201ENST00000217109 MARF1Q9Y4F3 1742 aaKnown RBP10.57□□□□□ -0.72
CSTF1-201ENST00000217109 ALS2Q96Q42 1657 aa10.57□□□□□ -0.72
CSTF1-201ENST00000217109 NKRFO15226 690 aaKnown RBP eCLIP10.56□□□□□ -0.72
CSTF1-201ENST00000217109 PPP1R11O60927 126 aaPredicted RBP10.56□□□□□ -0.72
CSTF1-201ENST00000217109 PON1P27169 355 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 CAPN12Q6ZSI9 719 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 ZNF571Q7Z3V5 609 aaPredicted RBP10.56□□□□□ -0.72
CSTF1-201ENST00000217109 ARL8AQ96BM9 186 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 DNAJC19Q96DA6 116 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 CCDC77Q9BR77 488 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 CELF4Q9BZC1 486 aaKnown RBP10.56□□□□□ -0.72
CSTF1-201ENST00000217109 PITPNM2Q9BZ72 1349 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 LRRIQ4A6NIV6 560 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 POLRMTO00411 1230 aaKnown RBP10.56□□□□□ -0.72
CSTF1-201ENST00000217109 TTI1O43156 1089 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 SOX5P35711 763 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 LIG4P49917 911 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 MTMR1Q13613 665 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 TMEM119Q4V9L6 283 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 SRLQ86TD4 932 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 NT5C1BQ96P26 610 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 KMT5AQ9NQR1 393 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 ANKFY1Q9P2R3 1169 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 PHRF1Q9P1Y6 1649 aaKnown RBP10.56□□□□□ -0.72
CSTF1-201ENST00000217109 FMO5P49326 533 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 KCNMA1Q12791 1236 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 FOXR1Q6PIV2 292 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 OTUD6AQ7L8S5 288 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 SLC35G2Q8TBE7 412 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 LRRC15Q8TF66 581 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 TMEM206Q9H813 350 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 FAM169AQ9Y6X4 670 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 GAKO14976 1311 aa10.56□□□□□ -0.72
CSTF1-201ENST00000217109 IRAK1P51617 712 aa10.55□□□□□ -0.72
CSTF1-201ENST00000217109 COL23A1Q86Y22 540 aaPredicted RBP10.55□□□□□ -0.72
CSTF1-201ENST00000217109 RPUSD2Q8IZ73 545 aaKnown RBP10.55□□□□□ -0.72
CSTF1-201ENST00000217109 XXYLT1Q8NBI6 393 aa10.55□□□□□ -0.72
CSTF1-201ENST00000217109 RMDN3Q96TC7 470 aa10.55□□□□□ -0.72
CSTF1-201ENST00000217109 STMN4Q9H169 189 aaPredicted RBP10.55□□□□□ -0.72
CSTF1-201ENST00000217109 FAM114A2Q9NRY5 505 aa10.55□□□□□ -0.72
CSTF1-201ENST00000217109 C1orf112Q9NSG2 853 aa10.55□□□□□ -0.72
CSTF1-201ENST00000217109 SEPT9Q9UHD8 586 aaPredicted RBP10.55□□□□□ -0.72
CSTF1-201ENST00000217109 FBXL5Q9UKA1 691 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms