RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CNOT6LQ96LI5 555 aaKnown RBP14.86□□□□□ -0.03
SIX4-201ENST00000216513 XPNPEP3Q9NQH7 507 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 ERAP1Q9NZ08 941 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 PHLPP2Q6ZVD8 1323 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 SPATA2LQ8IUW3 424 aaPredicted RBP14.86□□□□□ -0.03
SIX4-201ENST00000216513 TMEM169Q96HH4 297 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 TDP2O95551 362 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 PRKCBP05771 671 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 SUPT20HL2P0C7V6 817 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 CASP1P29466 404 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 YWHABP31946 246 aaKnown RBP14.86□□□□□ -0.03
SIX4-201ENST00000216513 HERVK_113P62684 666 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 KIF23Q02241 960 aaPredicted RBP14.86□□□□□ -0.03
SIX4-201ENST00000216513 PDCD6IPQ8WUM4 868 aaKnown RBP14.86□□□□□ -0.03
SIX4-201ENST00000216513 SECISBP2LQ93073 1101 aaKnown RBP14.86□□□□□ -0.03
SIX4-201ENST00000216513 TAAR1Q96RJ0 339 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 FANCLQ9NW38 375 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 MAP7D3Q8IWC1 876 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 NAPGQ99747 312 aaPredicted RBP14.86□□□□□ -0.03
SIX4-201ENST00000216513 RIC8AQ9NPQ8 531 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 MOCS2O96007 188 aaPredicted RBP14.86□□□□□ -0.03
SIX4-201ENST00000216513 CMA1P23946 247 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 MAP7D1Q3KQU3 841 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 C8orf74Q6P047 294 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 LY9Q9HBG7 655 aa14.86□□□□□ -0.03
SIX4-201ENST00000216513 ARL4AP40617 200 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 EFCAB12Q6NXP0 572 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 SYCE1Q8N0S2 351 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 NUCKS1Q9H1E3 243 aaKnown RBP14.85□□□□□ -0.03
SIX4-201ENST00000216513 NMRK2Q9NPI5 230 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 BARHL2Q9NY43 387 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 FARP1Q9Y4F1 1045 aaPredicted RBP14.85□□□□□ -0.03
SIX4-201ENST00000216513 ALCAMQ13740 583 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 ARL13BQ3SXY8 428 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 ANKRD42Q8N9B4 389 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 EIF2AK1Q9BQI3 630 aaKnown RBP14.85□□□□□ -0.03
SIX4-201ENST00000216513 DDX23Q9BUQ8 820 aaKnown RBP14.85□□□□□ -0.03
SIX4-201ENST00000216513 IRF1P10914 325 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 GBP1P32455 592 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 PDIA6Q15084 440 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 CAPNS2Q96L46 248 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 OSBPL3Q9H4L5 887 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 VCAM1P19320 739 aa14.85□□□□□ -0.03
SIX4-201ENST00000216513 GLTPD2A6NH11 291 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 SSTR3P32745 418 aaPredicted RBP14.84□□□□□ -0.03
SIX4-201ENST00000216513 MUM1L1Q5H9M0 696 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 DPH5Q9H2P9 285 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 A8MXQ7 604 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 MMP14P50281 582 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 SARNPP82979 210 aaKnown RBP14.84□□□□□ -0.03
SIX4-201ENST00000216513 SEPT8Q92599 483 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 DPF2Q92785 391 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 N4BP2L2Q92802 583 aaPredicted RBP14.84□□□□□ -0.03
SIX4-201ENST00000216513 DYRK4Q9NR20 520 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 MSRAQ9UJ68 235 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 PTPN22Q9Y2R2 807 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 LRG1P02750 347 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 RASA1P20936 1047 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 INHBEP58166 350 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 VGLL4Q14135 290 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 SFR1Q86XK3 245 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 TRPM4Q8TD43 1214 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 TTC25Q96NG3 672 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 TCF7P36402 384 aaPredicted RBP14.84□□□□□ -0.03
SIX4-201ENST00000216513 CDC42EP1Q00587 391 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 CLUL1Q15846 466 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 SOCS4Q8WXH5 440 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 GCNT4Q9P109 453 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 STRIP2Q9ULQ0 834 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 BCL9O00512 1426 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 RPS6P62753 249 aaKnown RBP14.84□□□□□ -0.03
SIX4-201ENST00000216513 SAAL1Q96ER3 474 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 VPS33BQ9H267 617 aa14.84□□□□□ -0.03
SIX4-201ENST00000216513 CACYBPQ9HB71 228 aaKnown RBP14.84□□□□□ -0.03
SIX4-201ENST00000216513 DDTLA6NHG4 134 aaPredicted RBP14.83□□□□□ -0.03
SIX4-201ENST00000216513 CHGBP05060 677 aa14.83□□□□□ -0.03
SIX4-201ENST00000216513 DNAJB2P25686 324 aa14.83□□□□□ -0.03
SIX4-201ENST00000216513 MGAT5BQ3V5L5 792 aa14.83□□□□□ -0.03
SIX4-201ENST00000216513 DNAJC24Q6P3W2 148 aa14.83□□□□□ -0.03
SIX4-201ENST00000216513 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.83□□□□□ -0.03
SIX4-201ENST00000216513 IFIH1Q9BYX4 1025 aaKnown RBP14.83□□□□□ -0.03
SIX4-201ENST00000216513 HPCAL4Q9UM19 191 aa14.83□□□□□ -0.03
SIX4-201ENST00000216513 BTBD8Q5XKL5 378 aa14.83□□□□□ -0.03
SIX4-201ENST00000216513 EPSTI1Q96J88 318 aa14.83□□□□□ -0.03
SIX4-201ENST00000216513 AMFRQ9UKV5 643 aa14.83□□□□□ -0.03
SIX4-201ENST00000216513 CXCL11O14625 94 aa14.83□□□□□ -0.04
SIX4-201ENST00000216513 SRGAP1Q7Z6B7 1085 aa14.83□□□□□ -0.04
SIX4-201ENST00000216513 DCLK2Q8N568 766 aa14.83□□□□□ -0.04
SIX4-201ENST00000216513 GINM1Q9NU53 330 aa14.83□□□□□ -0.04
SIX4-201ENST00000216513 CXCR5P32302 372 aa14.83□□□□□ -0.04
SIX4-201ENST00000216513 RPS6KA1Q15418 735 aa14.83□□□□□ -0.04
SIX4-201ENST00000216513 NEK9Q8TD19 979 aa14.83□□□□□ -0.04
SIX4-201ENST00000216513 MTMR6Q9Y217 621 aa14.83□□□□□ -0.04
SIX4-201ENST00000216513 UTP11Q9Y3A2 253 aaKnown RBP14.83□□□□□ -0.04
SIX4-201ENST00000216513 DYNLT1P63172 113 aa14.83□□□□□ -0.04
SIX4-201ENST00000216513 FOXD4Q12950 439 aaPredicted RBP14.83□□□□□ -0.04
SIX4-201ENST00000216513 LONRF2Q1L5Z9 754 aa14.83□□□□□ -0.04
SIX4-201ENST00000216513 IPO11Q9UI26 975 aaKnown RBP14.83□□□□□ -0.04
SIX4-201ENST00000216513 MAGEB2O15479 319 aa14.82□□□□□ -0.04
SIX4-201ENST00000216513 CCDC121Q6ZUS5 278 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms