RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 TAF1DQ9H5J8 278 aaPredicted RBP17.27■□□□□ 0.36
SNAPC1-201ENST00000216294 ATF5Q9Y2D1 282 aaPredicted RBP17.27■□□□□ 0.36
SNAPC1-201ENST00000216294 KRIT1O00522 736 aa17.27■□□□□ 0.35
SNAPC1-201ENST00000216294 TNFRSF8P28908 595 aa17.27■□□□□ 0.35
SNAPC1-201ENST00000216294 JAG1P78504 1218 aa17.27■□□□□ 0.35
SNAPC1-201ENST00000216294 IKQ13123 557 aaPredicted RBP17.27■□□□□ 0.35
SNAPC1-201ENST00000216294 ITGB3BPQ13352 177 aaPredicted RBP17.27■□□□□ 0.35
SNAPC1-201ENST00000216294 QPCTQ16769 361 aa17.27■□□□□ 0.35
SNAPC1-201ENST00000216294 GLE1Q53GS7 698 aaKnown RBP17.27■□□□□ 0.35
SNAPC1-201ENST00000216294 PALB2Q86YC2 1186 aa17.27■□□□□ 0.35
SNAPC1-201ENST00000216294 GLYCTKQ8IVS8 523 aa17.27■□□□□ 0.35
SNAPC1-201ENST00000216294 LRRC57Q8N9N7 239 aa17.27■□□□□ 0.35
SNAPC1-201ENST00000216294 GCNT4Q9P109 453 aa17.27■□□□□ 0.35
SNAPC1-201ENST00000216294 GREB1LQ9C091 1923 aaPredicted RBP17.27■□□□□ 0.35
SNAPC1-201ENST00000216294 TCP10L2B9ZVM9 353 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 DDX3XO00571 662 aaKnown RBP eCLIP17.26■□□□□ 0.351e-9■■■□□ 16.6
SNAPC1-201ENST00000216294 MEIS2O14770 477 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 HNRNPH1P31943 449 aaKnown RBP17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 CTNNA1P35221 906 aaKnown RBP17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 CTTNQ14247 550 aaKnown RBP17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 PTGISQ16647 500 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 TATDN1Q6P1N9 297 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 KDM7AQ6ZMT4 941 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 GBP6Q6ZN66 633 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 SIAH1Q8IUQ4 282 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 SPICE1Q8N0Z3 855 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 TPCN2Q8NHX9 752 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 UHMK1Q8TAS1 419 aaKnown RBP17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 EFCC1Q9HA90 598 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 SIX2Q9NPC8 291 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 SEPT11Q9NVA2 429 aaKnown RBP17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 EML1O00423 815 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 PPP1R37O75864 691 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 AFPP02771 609 aaKnown RBP17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 ICA1Q05084 483 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 SPIRE1Q08AE8 756 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 TBC1D10BQ4KMP7 808 aaPredicted RBP17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 GPATCH4Q5T3I0 446 aaKnown RBP17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 RSBN1LQ6PCB5 846 aaPredicted RBP17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 PEX26Q7Z412 305 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 NLRP14Q86W24 1093 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 MDM1Q8TC05 714 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 EDEM3Q9BZQ6 932 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 NT5C3AQ9H0P0 336 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 KCNMB3Q9NPA1 279 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 TAS2R14Q9NYV8 317 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 TSKSQ9UJT2 592 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 TMEM59LQ9UK28 342 aa17.26■□□□□ 0.35
SNAPC1-201ENST00000216294 ASTN1O14525 1302 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 SMIM23A6NLE4 172 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 XRCC5P13010 732 aaKnown RBP17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 MDH1P40925 334 aaKnown RBP17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 TNNC1P63316 161 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 ZNF844Q08AG5 666 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 RRP1BQ14684 758 aaKnown RBP17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 MYCBPAPQ8TBZ2 947 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 SYN2Q92777 582 aaPredicted RBP17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 ELMO3Q96BJ8 720 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 CSRNP1Q96S65 589 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 EPN3Q9H201 632 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 hCG_1984214I3L0E3 225 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 TRIM49P0CI25 452 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 TRIM49CP0CI26 452 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 USP11P51784 963 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 KNOP1Q1ED39 458 aaKnown RBP17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 ODF2Q5BJF6 829 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 RTKN2Q8IZC4 609 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 OTUD6BQ8N6M0 293 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 ZNF713Q8N859 430 aaPredicted RBP17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 LNX1Q8TBB1 728 aaPredicted RBP17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 LRRC27Q9C0I9 530 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 PPP1R9AQ9ULJ8 1098 aa17.25■□□□□ 0.35
SNAPC1-201ENST00000216294 NR3C1P04150 777 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 ARHGAP4P98171 946 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 EPHA7Q15375 998 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 ABCB5Q2M3G0 1257 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 SLFN13Q68D06 897 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 MAEAQ7L5Y9 396 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 DHX37Q8IY37 1157 aaKnown RBP17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 SCFD2Q8WU76 684 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 GLG1Q92896 1179 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 TMBIM4Q9HC24 238 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 NOVA2Q9UNW9 492 aaKnown RBP17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 SPDYE2BA6NHP3 402 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 H0YGN5 161 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 H0YHG0 523 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 NPM3O75607 178 aaKnown RBP17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 GH2P01242 217 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 SPDYE6P0CI01 402 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 ZBTB48P10074 688 aaPredicted RBP17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 GALCP54803 685 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 ORC2Q13416 577 aaPredicted RBP17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 ARHGAP44Q17R89 818 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 SLC35C1Q96A29 364 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 PSMD1Q99460 953 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 ISCUQ9H1K1 167 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 ERVK-5Q9HDB9 667 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 LUC7LQ9NQ29 371 aaKnown RBP17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 NYAP2Q9P242 653 aa17.24■□□□□ 0.35
SNAPC1-201ENST00000216294 NFS1Q9Y697 457 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms