RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 DPYDQ12882 1025 aa11.05□□□□□ -0.64
RTCB-201ENST00000216038 PLCB4Q15147 1175 aa11.05□□□□□ -0.64
RTCB-201ENST00000216038 XKR3Q5GH77 459 aa11.05□□□□□ -0.64
RTCB-201ENST00000216038 RINT1Q6NUQ1 792 aa11.05□□□□□ -0.64
RTCB-201ENST00000216038 PLPPR4Q7Z2D5 763 aa11.05□□□□□ -0.64
RTCB-201ENST00000216038 ZHX3Q9H4I2 956 aa11.05□□□□□ -0.64
RTCB-201ENST00000216038 TUT1Q9H6E5 874 aaKnown RBP11.05□□□□□ -0.64
RTCB-201ENST00000216038 ERAP1Q9NZ08 941 aa11.05□□□□□ -0.64
RTCB-201ENST00000216038 HOOK1Q9UJC3 728 aaKnown RBP11.05□□□□□ -0.64
RTCB-201ENST00000216038 Q9Y3F1 56 aa11.05□□□□□ -0.64
RTCB-201ENST00000216038 SFI1A8K8P3 1242 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 RSPH10B2B2RC85 870 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 GTPBP6O43824 516 aaPredicted RBP11.04□□□□□ -0.64
RTCB-201ENST00000216038 ADAMTS4O75173 837 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 RSPH10BP0C881 870 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 GJA9P57773 515 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 AMPD3Q01432 767 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 BRDTQ58F21 947 aaPredicted RBP11.04□□□□□ -0.64
RTCB-201ENST00000216038 LHX8Q68G74 356 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 PADI6Q6TGC4 694 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 CXCL17Q6UXB2 119 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 OTUD6AQ7L8S5 288 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 KAT2BQ92831 832 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 HPS3Q969F9 1004 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 CCDC34Q96HJ3 373 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.04□□□□□ -0.64
RTCB-201ENST00000216038 RNF208Q9H0X6 261 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 SPC25Q9HBM1 224 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 CYP26B1Q9NR63 512 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 FRMPD3Q5JV73 1810 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 DKC1O60832 514 aaKnown RBP eCLIP11.04□□□□□ -0.64
RTCB-201ENST00000216038 HOXD8P13378 290 aaPredicted RBP11.04□□□□□ -0.64
RTCB-201ENST00000216038 KCNA10Q16322 511 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 KIAA0753Q2KHM9 967 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 C1orf186Q6ZWK4 172 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 ATP8B4Q8TF62 1192 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 SMARCE1Q969G3 411 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 DNAJC19Q96DA6 116 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 DEFB118Q96PH6 123 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 REEP2Q9BRK0 252 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 MAGEF1Q9HAY2 307 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 GPRC5CQ9NQ84 441 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 NRBP2Q9NSY0 501 aa11.04□□□□□ -0.64
RTCB-201ENST00000216038 DBR1Q9UK59 544 aaKnown RBP11.04□□□□□ -0.64
RTCB-201ENST00000216038 ZNF215Q9UL58 517 aaPredicted RBP11.04□□□□□ -0.64
RTCB-201ENST00000216038 SPDYE4A6NLX3 237 aa11.03□□□□□ -0.64
RTCB-201ENST00000216038 ZBTB42B2RXF5 422 aa11.03□□□□□ -0.64
RTCB-201ENST00000216038 TULP2O00295 520 aa11.03□□□□□ -0.64
RTCB-201ENST00000216038 RPN1P04843 607 aaKnown RBP11.03□□□□□ -0.64
RTCB-201ENST00000216038 ASGR1P07306 291 aa11.03□□□□□ -0.64
RTCB-201ENST00000216038 CCL5P13501 91 aa11.03□□□□□ -0.64
RTCB-201ENST00000216038 PURAQ00577 322 aaKnown RBP11.03□□□□□ -0.64
RTCB-201ENST00000216038 GIT2Q14161 759 aa11.03□□□□□ -0.64
RTCB-201ENST00000216038 FBXO46Q6PJ61 603 aaPredicted RBP11.03□□□□□ -0.64
RTCB-201ENST00000216038 RBM43Q6ZSC3 357 aaKnown RBP11.03□□□□□ -0.64
RTCB-201ENST00000216038 SMYD4Q8IYR2 804 aaPredicted RBP11.03□□□□□ -0.64
RTCB-201ENST00000216038 C7orf25Q9BPX7 421 aa11.03□□□□□ -0.64
RTCB-201ENST00000216038 UPF3AQ9H1J1 476 aaKnown RBP11.03□□□□□ -0.64
RTCB-201ENST00000216038 ANKEF1Q9NU02 776 aa11.03□□□□□ -0.64
RTCB-201ENST00000216038 TBC1D7Q9P0N9 293 aa11.03□□□□□ -0.64
RTCB-201ENST00000216038 RBAK-RBAKDNI3L0D1 243 aa11.02□□□□□ -0.64
RTCB-201ENST00000216038 KLRC4O43908 158 aa11.02□□□□□ -0.64
RTCB-201ENST00000216038 F2P00734 622 aa11.02□□□□□ -0.64
RTCB-201ENST00000216038 INSRRP14616 1297 aa11.02□□□□□ -0.64
RTCB-201ENST00000216038 POLGP54098 1239 aaPredicted RBP11.02□□□□□ -0.64
RTCB-201ENST00000216038 LRRC41Q15345 812 aa11.02□□□□□ -0.64
RTCB-201ENST00000216038 KMT5BQ4FZB7 885 aa11.02□□□□□ -0.64
RTCB-201ENST00000216038 MAN1B1Q9UKM7 699 aa11.02□□□□□ -0.64
RTCB-201ENST00000216038 LAMA2P24043 3122 aaKnown RBP11.02□□□□□ -0.64
RTCB-201ENST00000216038 HIP1RO75146 1068 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 SMC2O95347 1197 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 BMP6P22004 513 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 SARSP49591 514 aaKnown RBP11.02□□□□□ -0.65
RTCB-201ENST00000216038 SLC26A2P50443 739 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 MFSD10Q14728 455 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 FAM102BQ5T8I3 360 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 ELOA2Q8IYF1 753 aaPredicted RBP11.02□□□□□ -0.65
RTCB-201ENST00000216038 LRRC71Q8N4P6 559 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 KCTD17Q8N5Z5 321 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 SPATA20Q8TB22 786 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 TMEM143Q96AN5 459 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 FAM167AQ96KS9 214 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 CEP89Q96ST8 783 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 NIFKQ9BYG3 293 aaKnown RBP11.02□□□□□ -0.65
RTCB-201ENST00000216038 SUGCTQ9HAC7 445 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 SETD4Q9NVD3 440 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 PANK4Q9NVE7 773 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 TUBE1Q9UJT0 475 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 MAPK8IP1Q9UQF2 711 aa11.02□□□□□ -0.65
RTCB-201ENST00000216038 HBP1O60381 514 aa11.01□□□□□ -0.65
RTCB-201ENST00000216038 MSCO60682 206 aa11.01□□□□□ -0.65
RTCB-201ENST00000216038 PSEN2P49810 448 aa11.01□□□□□ -0.65
RTCB-201ENST00000216038 TYRO3Q06418 890 aa11.01□□□□□ -0.65
RTCB-201ENST00000216038 TBC1D8BQ0IIM8 1120 aa11.01□□□□□ -0.65
RTCB-201ENST00000216038 DRP2Q13474 957 aa11.01□□□□□ -0.65
RTCB-201ENST00000216038 EMC2Q15006 297 aa11.01□□□□□ -0.65
RTCB-201ENST00000216038 TERF2Q15554 542 aa11.01□□□□□ -0.65
RTCB-201ENST00000216038 TARBP2Q15633 366 aaKnown RBP11.01□□□□□ -0.65
RTCB-201ENST00000216038 DPCR1Q3MIW9 517 aa11.01□□□□□ -0.65
RTCB-201ENST00000216038 HERC4Q5GLZ8 1057 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms