RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 TPX2Q9ULW0 747 aaKnown RBP14.53□□□□□ -0.08
SF3A1-201ENST00000215793 POTEMA6NI47 508 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 SFI1A8K8P3 1242 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 DCTN3O75935 186 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 STXBP2Q15833 593 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 PADI6Q6TGC4 694 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 PODNQ7Z5L7 613 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 CRLF3Q8IUI8 442 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 FMR1NBQ8N0W7 255 aaPredicted RBP14.53□□□□□ -0.08
SF3A1-201ENST00000215793 SPDYE1Q8NFV5 336 aaPredicted RBP14.53□□□□□ -0.08
SF3A1-201ENST00000215793 ZC3H15Q8WU90 426 aaKnown RBP14.53□□□□□ -0.08
SF3A1-201ENST00000215793 RAD54LQ92698 747 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 CDHR2Q9BYE9 1310 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 USP17L5A8MUK1 530 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 SLC4A1P02730 911 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 KRT80Q6KB66 452 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 GDAP1Q8TB36 358 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 FAM96AQ9H5X1 160 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 SCOCQ9UIL1 159 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 NCF2P19878 526 aaPredicted RBP14.53□□□□□ -0.08
SF3A1-201ENST00000215793 PRDX5P30044 214 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 KCNQ4P56696 695 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 DALRD3Q5D0E6 543 aaKnown RBP14.53□□□□□ -0.08
SF3A1-201ENST00000215793 TRIM67Q6ZTA4 783 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 FAF2Q96CS3 445 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 PITPNM3Q9BZ71 974 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 ZWILCHQ9H900 591 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 KIF9Q9HAQ2 790 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 HOXC10Q9NYD6 342 aa14.53□□□□□ -0.08
SF3A1-201ENST00000215793 MAGED2Q9UNF1 606 aaPredicted RBP14.53□□□□□ -0.08
SF3A1-201ENST00000215793 UTYO14607 1347 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 MAP3K7O43318 606 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 PAMP19021 973 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 GUCY2CP25092 1073 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 KCNH2Q12809 1159 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 SLC12A1Q13621 1099 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 EPHA10Q5JZY3 1008 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 WDR91A4D1P6 747 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 RPSAP08865 295 aaKnown RBP14.52□□□□□ -0.08
SF3A1-201ENST00000215793 TAC1P20366 129 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 PEX19P40855 299 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 CRKP46108 304 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 ENAHQ8N8S7 591 aaPredicted RBP14.52□□□□□ -0.08
SF3A1-201ENST00000215793 TRIM55Q9BYV6 548 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 OSBPL5Q9H0X9 879 aaPredicted RBP14.52□□□□□ -0.08
SF3A1-201ENST00000215793 SAYSD1Q9NPB0 183 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 ASNSD1Q9NWL6 643 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 FEM1BQ9UK73 627 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 MINPP1Q9UNW1 487 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 SNX24Q9Y343 169 aa14.52□□□□□ -0.08
SF3A1-201ENST00000215793 COPEO14579 308 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 ELF1P32519 619 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 ARPP19P56211 112 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 OCRLQ01968 901 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 RCSD1Q6JBY9 416 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 TOGARAM2Q6ZUX3 1019 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 MB21D2Q8IYB1 491 aaPredicted RBP14.52□□□□□ -0.09
SF3A1-201ENST00000215793 NDUFAF2Q8N183 169 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 PLAAQ9Y263 795 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 FIS1Q9Y3D6 152 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 LRRC53A6NM62 1247 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 MMP10P09238 476 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 SFNP31947 248 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 HLFQ16534 295 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 CDO1Q16878 200 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 PPP6R3Q5H9R7 873 aaPredicted RBP14.52□□□□□ -0.09
SF3A1-201ENST00000215793 LRRC43Q8N309 656 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 MAML1Q92585 1016 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 DCP1AQ9NPI6 582 aaPredicted RBP14.52□□□□□ -0.09
SF3A1-201ENST00000215793 GJB4Q9NTQ9 266 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 NARFQ9UHQ1 456 aa14.52□□□□□ -0.09
SF3A1-201ENST00000215793 NEDD4P46934 1319 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 CYP27B1O15528 508 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 PRCPP42785 496 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 PAPOLAP51003 745 aaKnown RBP14.51□□□□□ -0.09
SF3A1-201ENST00000215793 APOEP02649 317 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 RXRBP28702 533 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 SOX5P35711 763 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 KNOP1Q1ED39 458 aaKnown RBP14.51□□□□□ -0.09
SF3A1-201ENST00000215793 GUF1Q8N442 669 aaKnown RBP14.51□□□□□ -0.09
SF3A1-201ENST00000215793 SYT2Q8N9I0 419 aaPredicted RBP14.51□□□□□ -0.09
SF3A1-201ENST00000215793 NSUN6Q8TEA1 469 aaKnown RBP14.51□□□□□ -0.09
SF3A1-201ENST00000215793 HSPH1Q92598 858 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 TRAIPQ9BWF2 469 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 CD209Q9NNX6 404 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 FNDC3AQ9Y2H6 1198 aaKnown RBP14.51□□□□□ -0.09
SF3A1-201ENST00000215793 CYP2D6P10635 497 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 TBXAS1P24557 533 aaPredicted RBP14.51□□□□□ -0.09
SF3A1-201ENST00000215793 MARK3P27448 753 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 GCLMP48507 274 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 FAM83BQ5T0W9 1011 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 SLC10A4Q96EP9 437 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 HSPA4LO95757 839 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 PHKA2P46019 1235 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 COASYQ13057 564 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 GRM4Q14833 912 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 TAF11Q15544 211 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 TTC39CQ8N584 583 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 GIPC2Q8TF65 315 aa14.51□□□□□ -0.09
SF3A1-201ENST00000215793 FAM49AQ9H0Q0 323 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms