RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 PYM1Q9BRP8 204 aaKnown RBP16.11■□□□□ 0.17
TMEM38A-201ENST00000187762 DLGAP2Q9P1A6 1054 aa16.11■□□□□ 0.17
TMEM38A-201ENST00000187762 TRIM33Q9UPN9 1127 aa16.11■□□□□ 0.17
TMEM38A-201ENST00000187762 CD2APQ9Y5K6 639 aa16.11■□□□□ 0.17
TMEM38A-201ENST00000187762 OAS1P00973 400 aaKnown RBP16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 GFPT1Q06210 699 aaPredicted RBP16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 NFIXQ14938 502 aa16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 MIIPQ5JXC2 388 aa16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 TPTE2Q6XPS3 522 aa16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 GBP7Q8N8V2 638 aaPredicted RBP16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 CCDC134Q9H6E4 229 aa16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 DNAAF2Q9NVR5 837 aaKnown RBP16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.1■□□□□ 0.175e-12■■■■■ 117.9
TMEM38A-201ENST00000187762 ZNF232Q9UNY5 417 aa16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 ZNF831Q5JPB2 1677 aa16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 EPHB6O15197 1021 aa16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 MTIF2P46199 727 aaKnown RBP16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 DHX9Q08211 1270 aaKnown RBP16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 MEI1Q5TIA1 1274 aa16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 CSGALNACT2Q8N6G5 542 aa16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 PROCA1Q8NCQ7 364 aaPredicted RBP16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 IFT43Q96FT9 208 aa16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 CNOT6LQ96LI5 555 aaKnown RBP16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 DUSP9Q99956 384 aaKnown RBP16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 NOC4LQ9BVI4 516 aaKnown RBP16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 SH3GLB2Q9NR46 395 aa16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 INTS9Q9NV88 658 aaKnown RBP16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
TMEM38A-201ENST00000187762 PSMA7O14818 248 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 KLRC4O43908 158 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 RPS6KA4O75676 772 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 RAD23BP54727 409 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 EIF3BP55884 814 aaKnown RBP16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 EHHADHQ08426 723 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 SPTY2D1Q68D10 685 aaPredicted RBP16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 OR52E8Q6IFG1 317 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 IQCDQ96DY2 449 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 FGD4Q96M96 766 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 TMEM47Q9BQJ4 181 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 MMADHCQ9H3L0 296 aaPredicted RBP16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 RNPEPL1Q9HAU8 725 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 USP15Q9Y4E8 981 aaPredicted RBP16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 E7ENQ6 273 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 MYL1P05976 194 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 ABCD1P33897 745 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 UBA7P41226 1012 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 MYBPC3Q14896 1274 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 HOOK3Q86VS8 718 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 TRAPPC9Q96Q05 1148 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 ZWILCHQ9H900 591 aa16.09■□□□□ 0.17
TMEM38A-201ENST00000187762 DAPK3O43293 454 aa16.08■□□□□ 0.17
TMEM38A-201ENST00000187762 ACADSP16219 412 aa16.08■□□□□ 0.17
TMEM38A-201ENST00000187762 CALB2P22676 271 aa16.08■□□□□ 0.17
TMEM38A-201ENST00000187762 PEX5P50542 639 aa16.08■□□□□ 0.17
TMEM38A-201ENST00000187762 ASTE1Q2TB18 679 aaPredicted RBP16.08■□□□□ 0.17
TMEM38A-201ENST00000187762 MYLK4Q86YV6 388 aaPredicted RBP16.08■□□□□ 0.17
TMEM38A-201ENST00000187762 ZSCAN29Q8IWY8 852 aaPredicted RBP16.08■□□□□ 0.17
TMEM38A-201ENST00000187762 ZNF444Q8N0Y2 327 aaPredicted RBP16.08■□□□□ 0.17
TMEM38A-201ENST00000187762 VCXQ9H320 206 aa16.08■□□□□ 0.17
TMEM38A-201ENST00000187762 CDK5RAP2Q96SN8 1893 aa16.08■□□□□ 0.16
TMEM38A-201ENST00000187762 LRRC53A6NM62 1247 aa16.08■□□□□ 0.16
TMEM38A-201ENST00000187762 FOXB2Q5VYV0 432 aa16.08■□□□□ 0.16
TMEM38A-201ENST00000187762 PHC3Q8NDX5 983 aa16.08■□□□□ 0.16
TMEM38A-201ENST00000187762 ANKS1AQ92625 1134 aa16.08■□□□□ 0.16
TMEM38A-201ENST00000187762 ARHGEF1Q92888 912 aaKnown RBP16.08■□□□□ 0.16
TMEM38A-201ENST00000187762 FAM207AQ9NSI2 230 aaPredicted RBP16.08■□□□□ 0.16
TMEM38A-201ENST00000187762 BARHL2Q9NY43 387 aa16.08■□□□□ 0.16
TMEM38A-201ENST00000187762 PHF24Q9UPV7 400 aa16.08■□□□□ 0.16
TMEM38A-201ENST00000187762 BAG3O95817 575 aa16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 IFNAR2P48551 515 aa16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 PDE6CP51160 858 aa16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 KCTD19Q17RG1 926 aaPredicted RBP16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 SYCP3Q8IZU3 236 aa16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 SLC17A8Q8NDX2 589 aa16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 SCFD2Q8WU76 684 aa16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 FAM163AQ96GL9 167 aaPredicted RBP16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 NKRFO15226 690 aaKnown RBP eCLIP16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 RASA1P20936 1047 aa16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 RRAGAQ7L523 313 aa16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 LONP2Q86WA8 852 aa16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 OCEL1Q9H607 264 aa16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 ROBO3Q96MS0 1386 aa16.07■□□□□ 0.16
TMEM38A-201ENST00000187762 BTAF1O14981 1849 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 PALM3A6NDB9 673 aaPredicted RBP16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 PEX11AO75192 247 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 TSNAXIP1Q2TAA8 658 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 LETM2Q2VYF4 491 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 CCDC178Q5BJE1 867 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 WDR66Q8TBY9 1149 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 RBM17Q96I25 401 aaKnown RBP16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 GOPCQ9HD26 462 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 KLRF2D3W0D1 207 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 SMAPO00193 183 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 LGR5O75473 907 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 SUN1O94901 812 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 TPBGLP0DKB5 382 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 PLCG1P19174 1290 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 PSMC4P43686 418 aa16.06■□□□□ 0.16
TMEM38A-201ENST00000187762 NAB2Q15742 525 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms