RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 PPP1R18Q6NYC8 613 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 C4orf50Q6ZRC1 276 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 RPF1Q9H9Y2 349 aaKnown RBP12.91□□□□□ -0.34
TRO-201ENST00000173898 WDR64B1ANS9 1081 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 AKR1B1P15121 316 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 JAK3P52333 1124 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 DRAP1Q14919 205 aaPredicted RBP12.91□□□□□ -0.34
TRO-201ENST00000173898 RASIP1Q5U651 963 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 USP49Q70CQ1 688 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 NSUN4Q96CB9 384 aaKnown RBP12.91□□□□□ -0.34
TRO-201ENST00000173898 ELAC2Q9BQ52 826 aaKnown RBP12.91□□□□□ -0.34
TRO-201ENST00000173898 KCNF1Q9H3M0 494 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 VCX3AQ9NNX9 186 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 CLDN3O15551 220 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 ZBED1O96006 694 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 LDHAP00338 332 aaKnown RBP12.91□□□□□ -0.34
TRO-201ENST00000173898 RFC1P35251 1148 aaPredicted RBP12.91□□□□□ -0.34
TRO-201ENST00000173898 ANKRD40Q6AI12 368 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 ZNF746Q6NUN9 644 aaPredicted RBP12.91□□□□□ -0.34
TRO-201ENST00000173898 RTKN2Q8IZC4 609 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 GBP7Q8N8V2 638 aaPredicted RBP12.91□□□□□ -0.34
TRO-201ENST00000173898 TRIM9Q9C026 710 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 ZWILCHQ9H900 591 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 RAVER2Q9HCJ3 691 aaKnown RBP12.91□□□□□ -0.34
TRO-201ENST00000173898 PACSIN2Q9UNF0 486 aaPredicted RBP12.91□□□□□ -0.34
TRO-201ENST00000173898 NRKQ7Z2Y5 1582 aa12.91□□□□□ -0.34
TRO-201ENST00000173898 RNF17Q9BXT8 1623 aaKnown RBP12.9□□□□□ -0.34
TRO-201ENST00000173898 PFDN6O15212 129 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 FMR1Q06787 632 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRO-201ENST00000173898 CDO1Q16878 200 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 ZNF667Q5HYK9 610 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 JADE1Q6IE81 842 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 GINM1Q9NU53 330 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 KIF3CO14782 793 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 ZNF18P17022 549 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 KCNB1Q14721 858 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 NAALADL2Q58DX5 795 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 TMEM35BQ8NCS4 154 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 HPS3Q969F9 1004 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 TBC1D22BQ9NU19 505 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 DIS3Q9Y2L1 958 aaKnown RBP12.9□□□□□ -0.34
TRO-201ENST00000173898 MRFAP1Q9Y605 127 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 OSBPP22059 807 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 PSMA2P25787 234 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 PASD1Q8IV76 773 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 CHP1Q99653 195 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 C11orf70Q9BRQ4 267 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 FAM213AQ9BRX8 229 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 CCSER1Q9C0I3 900 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 IPO11Q9UI26 975 aaKnown RBP12.9□□□□□ -0.34
TRO-201ENST00000173898 TLK1Q9UKI8 766 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 ATP1A1P05023 1023 aaKnown RBP12.9□□□□□ -0.34
TRO-201ENST00000173898 ZNF449Q6P9G9 518 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 GLYCTKQ8IVS8 523 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 PLA2G12BQ9BX93 195 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 Q9H521 79 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 ACTR5Q9H9F9 607 aaPredicted RBP12.9□□□□□ -0.34
TRO-201ENST00000173898 CAPN11Q9UMQ6 739 aa12.9□□□□□ -0.34
TRO-201ENST00000173898 FRMD3A2A2Y4 597 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 DENND3A2RUS2 1198 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 IPO5O00410 1097 aaKnown RBP12.89□□□□□ -0.35
TRO-201ENST00000173898 TOM1L1O75674 476 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 TJP3O95049 919 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 MMEP08473 750 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 TRIM49P0CI25 452 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 TRIM49CP0CI26 452 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 PEX19P40855 299 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 TMEM270Q6UE05 265 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 AP5M1Q9H0R1 490 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 SAYSD1Q9NPB0 183 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 FTLP02792 175 aaPredicted RBP12.89□□□□□ -0.35
TRO-201ENST00000173898 SRGAP2BP0DMP2 458 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 QARSP47897 775 aaKnown RBP12.89□□□□□ -0.35
TRO-201ENST00000173898 CCZ1BP86790 482 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 CCZ1P86791 482 aaPredicted RBP12.89□□□□□ -0.35
TRO-201ENST00000173898 SEMA3FQ13275 785 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 PLCB4Q15147 1175 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 PPP6R3Q5H9R7 873 aaPredicted RBP12.89□□□□□ -0.35
TRO-201ENST00000173898 ABCB11O95342 1321 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 LAMC1P11047 1609 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 MYO1CO00159 1063 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 P4HBP07237 508 aaKnown RBP12.89□□□□□ -0.35
TRO-201ENST00000173898 VAMP7P51809 220 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 MUM1L1Q5H9M0 696 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 RC3H1Q5TC82 1133 aaKnown RBP12.89□□□□□ -0.35
TRO-201ENST00000173898 PITPNM3Q9BZ71 974 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 SEL1LQ9UBV2 794 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 A0A1B0GTH6 734 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 TADA3O75528 432 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 FDPSP14324 419 aaKnown RBP12.89□□□□□ -0.35
TRO-201ENST00000173898 GUCY2CP25092 1073 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 ANTXR2P58335 489 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 KRT76Q01546 638 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 TBC1D1Q86TI0 1168 aaPredicted RBP12.89□□□□□ -0.35
TRO-201ENST00000173898 RSPH3Q86UC2 560 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 SIX6OS1Q8N1H7 587 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 THOC1Q96FV9 657 aaKnown RBP12.89□□□□□ -0.35
TRO-201ENST00000173898 ATP6V0A4Q9HBG4 840 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 KIAA1586Q9HCI6 787 aa12.89□□□□□ -0.35
TRO-201ENST00000173898 TXLNGQ9NUQ3 528 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms