RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 SCYL3Q8IZE3 742 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 MICAL1Q8TDZ2 1067 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 FAM20AQ96MK3 541 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 PNPLA6Q8IY17 1366 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 ZBED1O96006 694 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 CASP2P42575 452 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 MCPH1Q8NEM0 835 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 RNF139Q8WU17 664 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 ATP6V1E2Q96A05 226 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 DAGLAQ9Y4D2 1042 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 NRKQ7Z2Y5 1582 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 CASQ2O14958 399 aaPredicted RBP20.25■□□□□ 0.83
MBD3-201ENST00000156825 SATB1Q01826 763 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 ESYT3A0FGR9 886 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 SUN1O94901 812 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 APBA1Q02410 837 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 IL25Q9H293 177 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 HDAC6Q9UBN7 1215 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 RASGRF2O14827 1237 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 ZNF609O15014 1411 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 MT-ND3P03897 115 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 TTC7AQ9ULT0 858 aaPredicted RBP20.24■□□□□ 0.83
MBD3-201ENST00000156825 NEK9Q8TD19 979 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 TBC1D22BQ9NU19 505 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 PCSK1NQ9UHG2 260 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 PNMA3Q9UL41 463 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 RNF25Q96BH1 459 aaPredicted RBP20.24■□□□□ 0.83
MBD3-201ENST00000156825 POLIQ9UNA4 740 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 GOLGA8MH3BSY2 632 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 EXOSC10Q01780 885 aaKnown RBP20.24■□□□□ 0.83
MBD3-201ENST00000156825 SARM1Q6SZW1 724 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 LDHDQ86WU2 507 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 BBS5Q8N3I7 341 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 CCDC197Q8NCU1 140 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 TCP11Q8WWU5 503 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 HEY1Q9Y5J3 304 aa20.24■□□□□ 0.83
MBD3-201ENST00000156825 TOM1L1O75674 476 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 SERPINB6P35237 376 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 ALCAMQ13740 583 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 MUM1L1Q5H9M0 696 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 NOP9Q86U38 636 aaKnown RBP20.23■□□□□ 0.83
MBD3-201ENST00000156825 SP8Q8IXZ3 490 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 EIF2AK1Q9BQI3 630 aaKnown RBP20.23■□□□□ 0.83
MBD3-201ENST00000156825 TRPM1Q7Z4N2 1603 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 MYO3BQ8WXR4 1341 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 ZNF699Q32M78 642 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 HP1BP3Q5SSJ5 553 aaPredicted RBP20.23■□□□□ 0.83
MBD3-201ENST00000156825 PRR5LQ6MZQ0 368 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 ARMCX2Q7L311 632 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 FAM81BQ96LP2 452 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 IFT122Q9HBG6 1241 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 CEP72Q9P209 647 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 CRB1P82279 1406 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 TYW5A2RUC4 315 aaKnown RBP20.23■□□□□ 0.83
MBD3-201ENST00000156825 TMTC4Q5T4D3 741 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 ZNF302Q9NR11 478 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 SART1O43290 800 aaKnown RBP20.23■□□□□ 0.83
MBD3-201ENST00000156825 P4HBP07237 508 aaKnown RBP20.23■□□□□ 0.83
MBD3-201ENST00000156825 MTF1Q14872 753 aa20.23■□□□□ 0.83
MBD3-201ENST00000156825 FAM133BQ5BKY9 247 aaKnown RBP20.23■□□□□ 0.83
MBD3-201ENST00000156825 IPO11Q9UI26 975 aaKnown RBP20.23■□□□□ 0.83
MBD3-201ENST00000156825 PVALEFA0A1B0GWK0 134 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 PFDN6O15212 129 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 DRAP1Q14919 205 aaPredicted RBP20.22■□□□□ 0.83
MBD3-201ENST00000156825 USP49Q70CQ1 688 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 PSPC1Q8WXF1 523 aaKnown RBP20.22■□□□□ 0.83
MBD3-201ENST00000156825 ANKRD65E5RJM6 399 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 ORC4O43929 436 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 NMT1P30419 496 aaKnown RBP20.22■□□□□ 0.83
MBD3-201ENST00000156825 KRT76Q01546 638 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 NFRKBQ6P4R8 1299 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 DPF2Q92785 391 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 WDR19Q8NEZ3 1342 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 MIPOL1Q8TD10 442 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 RNF14Q9UBS8 474 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 SCN4BQ8IWT1 228 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 PYROXD1Q8WU10 500 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 RPAP3Q9H6T3 665 aaPredicted RBP20.22■□□□□ 0.83
MBD3-201ENST00000156825 CA4P22748 312 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 METTL16Q86W50 562 aaKnown RBP20.22■□□□□ 0.83
MBD3-201ENST00000156825 C2orf69Q8N8R5 385 aa20.22■□□□□ 0.83
MBD3-201ENST00000156825 PNPLA7Q6ZV29 1317 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 OVOS2A0A0G2JMS6 1433 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 OVOS2A0A0J9YW53 1432 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 OVOS2Q6IE36 1432 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 CLGNO14967 610 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 VAMP7P51809 220 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 RHOT2Q8IXI1 618 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 ZMYND12Q9H0C1 365 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 SLITRK6Q9H5Y7 841 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 SLC12A6Q9UHW9 1150 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 RNF17Q9BXT8 1623 aaKnown RBP20.21■□□□□ 0.83
MBD3-201ENST00000156825 TTC36A6NLP5 189 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 ZRANB2O95218 330 aaKnown RBP eCLIP20.21■□□□□ 0.83
MBD3-201ENST00000156825 LDHAP00338 332 aaKnown RBP20.21■□□□□ 0.83
MBD3-201ENST00000156825 ATP2C1P98194 919 aaPredicted RBP20.21■□□□□ 0.83
MBD3-201ENST00000156825 MTMR2Q13614 643 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 TRIM56Q9BRZ2 755 aaKnown RBP20.21■□□□□ 0.83
MBD3-201ENST00000156825 ANGPTL3Q9Y5C1 460 aa20.21■□□□□ 0.83
MBD3-201ENST00000156825 SRGAP2BP0DMP2 458 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms