RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 ZC2HC1CQ53FD0 456 aaPredicted RBP9.04□□□□□ -0.96
VAMP3-201ENST00000054666 NBPF12Q5TAG4 269 aaPredicted RBP9.04□□□□□ -0.96
VAMP3-201ENST00000054666 CCDC181Q5TID7 509 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 KLHDC7AQ5VTJ3 777 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 ARHGEF16Q5VV41 709 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 FMNL3Q8IVF7 1028 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 ZNF280CQ8ND82 737 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 SLC35C1Q96A29 364 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 WRNIP1Q96S55 665 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 RMDN3Q96TC7 470 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 RNF146Q9NTX7 359 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 FAM53CQ9NYF3 392 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 DBR1Q9UK59 544 aaKnown RBP9.04□□□□□ -0.96
VAMP3-201ENST00000054666 FBXL5Q9UKA1 691 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 TESPA1A2RU30 521 aaPredicted RBP9.04□□□□□ -0.96
VAMP3-201ENST00000054666 WDR64B1ANS9 1081 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 TLR2O60603 784 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 SRGAP2O75044 1071 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 ACTN1P12814 892 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 SLC9A1P19634 815 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 PON1P27169 355 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 ANXA13P27216 316 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 SFNP31947 248 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 KRT76Q01546 638 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 APBA1Q02410 837 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 PPP2R5AQ15172 486 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 MAP9Q49MG5 647 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 C10orf76Q5T2E6 689 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 NOA1Q8NC60 698 aaKnown RBP9.04□□□□□ -0.96
VAMP3-201ENST00000054666 HNRNPLLQ8WVV9 542 aaKnown RBP9.04□□□□□ -0.96
VAMP3-201ENST00000054666 ATG4CQ96DT6 458 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 TAAR1Q96RJ0 339 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 TIPINQ9BVW5 301 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 TMEM206Q9H813 350 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 PRDM10Q9NQV6 1147 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 PXMP2Q9NR77 195 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 AGPAT3Q9NRZ7 376 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 CD2APQ9Y5K6 639 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 ZHX2Q9Y6X8 837 aa9.04□□□□□ -0.96
VAMP3-201ENST00000054666 ASTN2O75129 1339 aaPredicted RBP9.03□□□□□ -0.96
VAMP3-201ENST00000054666 PHIPQ8WWQ0 1821 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 FZD9O00144 591 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 VWA5AO00534 786 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 EXOC3O60645 756 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 TBC1D8O95759 1140 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 MAPTP10636 758 aaKnown RBP9.03□□□□□ -0.96
VAMP3-201ENST00000054666 KRT13P13646 458 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 CCND2P30279 289 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 YWHABP31946 246 aaKnown RBP9.03□□□□□ -0.96
VAMP3-201ENST00000054666 RARRES1P49788 294 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 MRPS9P82933 396 aaKnown RBP9.03□□□□□ -0.96
VAMP3-201ENST00000054666 ITGB3BPQ13352 177 aaPredicted RBP9.03□□□□□ -0.96
VAMP3-201ENST00000054666 XRRA1Q6P2D8 792 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 NLRX1Q86UT6 975 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 SLC17A8Q8NDX2 589 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 FIZ1Q96SL8 496 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 PNKPQ96T60 521 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 MMS19Q96T76 1030 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 PDCD2LQ9BRP1 358 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 RNF216Q9NWF9 866 aaPredicted RBP9.03□□□□□ -0.96
VAMP3-201ENST00000054666 DAAM1Q9Y4D1 1078 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 DHX15O43143 795 aaKnown RBP9.03□□□□□ -0.96
VAMP3-201ENST00000054666 BUB1O43683 1085 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 EIF3JO75822 258 aaKnown RBP9.03□□□□□ -0.96
VAMP3-201ENST00000054666 LYPLA2O95372 231 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 PRLRP16471 622 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 PAFAH1B1P43034 410 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 OAZ1P54368 228 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 MYL7Q01449 175 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 MYBPC2Q14324 1141 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 IFI16Q16666 785 aaKnown RBP9.03□□□□□ -0.96
VAMP3-201ENST00000054666 KIAA0753Q2KHM9 967 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 WDR93Q6P2C0 686 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 MAEAQ7L5Y9 396 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 HDXQ7Z353 690 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 CCDC125Q86Z20 511 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 ANKRD13CQ8N6S4 541 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 RDM1Q8NG50 284 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 ACCSQ96QU6 501 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 IWS1Q96ST2 819 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 BCAS3Q9H6U6 928 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 TMOD4Q9NZQ9 345 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 ADAMTS1Q9UHI8 967 aa9.03□□□□□ -0.96
VAMP3-201ENST00000054666 PARP14Q460N5 1801 aa9.02□□□□□ -0.96
VAMP3-201ENST00000054666 TARSL2A2RTX5 802 aaKnown RBP9.02□□□□□ -0.97
VAMP3-201ENST00000054666 C19orf81C9J6K1 198 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 DKC1O60832 514 aaKnown RBP eCLIP9.02□□□□□ -0.97
VAMP3-201ENST00000054666 N4BP1O75113 896 aaKnown RBP9.02□□□□□ -0.97
VAMP3-201ENST00000054666 PPP1R37O75864 691 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 CCDC172P0C7W6 258 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 PLS3P13797 630 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 FERP16591 822 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 PTPRAP18433 802 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 PRKCIP41743 596 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 STAT1P42224 750 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 FMO5P49326 533 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 HMGCS2P54868 508 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 PSMC5P62195 406 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 VSNL1P62760 191 aa9.02□□□□□ -0.97
VAMP3-201ENST00000054666 BFSP1Q12934 665 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms