RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 SERPINB13Q9UIV8 391 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 SNX24Q9Y343 169 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 BZW2Q9Y6E2 419 aaKnown RBP15.26■□□□□ 0.03
USH1C-201ENST00000005226 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
USH1C-201ENST00000005226 ATXN2Q99700 1313 aaKnown RBP15.26■□□□□ 0.03
USH1C-201ENST00000005226 CES2O00748 559 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 USP8P40818 1118 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 JAM2P57087 298 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 CPLX4Q7Z7G2 160 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 ATP8B4Q8TF62 1192 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 ZKSCAN4Q969J2 545 aaPredicted RBP15.26■□□□□ 0.03
USH1C-201ENST00000005226 CALR3Q96L12 384 aaKnown RBP15.26■□□□□ 0.03
USH1C-201ENST00000005226 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.26■□□□□ 0.03
USH1C-201ENST00000005226 SUCLA2Q9P2R7 463 aaPredicted RBP15.26■□□□□ 0.03
USH1C-201ENST00000005226 AMFRQ9UKV5 643 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 NENFQ9UMX5 172 aa15.26■□□□□ 0.03
USH1C-201ENST00000005226 SPDYE3A6NKU9 549 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 FAM86B1E9PN63 330 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 OPLAHO14841 1288 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 RASSF9O75901 435 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 FAM86B2P0C5J1 330 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 PRKCIP41743 596 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 ARHGAP4P98171 946 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 ARHGAP44Q17R89 818 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 EPM2AIP1Q7L775 607 aaPredicted RBP15.25■□□□□ 0.03
USH1C-201ENST00000005226 DHX37Q8IY37 1157 aaKnown RBP15.25■□□□□ 0.03
USH1C-201ENST00000005226 RASGEF1CQ8N431 466 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 CCDC26Q8TAB7 109 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 OLIG1Q8TAK6 271 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 HES6Q96HZ4 224 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 MYCBPQ99417 103 aaPredicted RBP15.25■□□□□ 0.03
USH1C-201ENST00000005226 UTP11Q9Y3A2 253 aaKnown RBP15.25■□□□□ 0.03
USH1C-201ENST00000005226 GAKO14976 1311 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 MEIS2O14770 477 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 CALUO43852 315 aaPredicted RBP15.25■□□□□ 0.03
USH1C-201ENST00000005226 TRIM49P0CI25 452 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 TRIM49CP0CI26 452 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 HOXA13P31271 388 aaPredicted RBP15.25■□□□□ 0.03
USH1C-201ENST00000005226 PLTPP55058 493 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 SETQ01105 290 aaPredicted RBP15.25■□□□□ 0.03
USH1C-201ENST00000005226 NFIAQ12857 509 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 BIRC3Q13489 604 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 LLGL1Q15334 1064 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 PRR5LQ6MZQ0 368 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 PPP4R3CPQ6ZMV5 832 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 RDH13Q8NBN7 331 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 TBC1D16Q8TBP0 767 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 FAM163AQ96GL9 167 aaPredicted RBP15.25■□□□□ 0.03
USH1C-201ENST00000005226 STRCQ7RTU9 1775 aa15.25■□□□□ 0.03
USH1C-201ENST00000005226 CCDC188H7C350 402 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 EML1O00423 815 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 TGFB1I1O43294 461 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 LRRN2O75325 713 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 MAP2K2P36507 400 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 SMTNP53814 917 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 POU5F1Q01860 360 aaKnown RBP15.24■□□□□ 0.03
USH1C-201ENST00000005226 CTTNQ14247 550 aaKnown RBP15.24■□□□□ 0.03
USH1C-201ENST00000005226 DRAP1Q14919 205 aaPredicted RBP15.24■□□□□ 0.03
USH1C-201ENST00000005226 PPP1R18Q6NYC8 613 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 SYT2Q8N9I0 419 aaPredicted RBP15.24■□□□□ 0.03
USH1C-201ENST00000005226 ETNPPLQ8TBG4 499 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 LMBR1Q8WVP7 490 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 GEMIN8Q9NWZ8 242 aaKnown RBP15.24■□□□□ 0.03
USH1C-201ENST00000005226 PCDHAC2Q9Y5I4 1007 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 WNK3Q9BYP7 1800 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 TMEM110-MUSTN1A8MSY1 372 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 PDXKO00764 312 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 DDX3YO15523 660 aaKnown RBP15.24■□□□□ 0.03
USH1C-201ENST00000005226 CLSTN1O94985 981 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 TCP10Q12799 353 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 ANKRD20A8PQ5CZ79 823 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 VPS36Q86VN1 386 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 PSMD1Q99460 953 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 SELENOSQ9BQE4 189 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 MTFR1LQ9H019 292 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 THAP2Q9H0W7 228 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 DNAJC12Q9UKB3 198 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 PITPNM2Q9BZ72 1349 aa15.24■□□□□ 0.03
USH1C-201ENST00000005226 IFI35P80217 286 aaPredicted RBP15.23■□□□□ 0.03
USH1C-201ENST00000005226 AGBL2Q5U5Z8 902 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 CACNA2D3Q8IZS8 1091 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 ALG3Q92685 438 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 FMO2Q99518 471 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 SLITRK6Q9H5Y7 841 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 COG5Q9UP83 839 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 CHMP2AO43633 222 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 DRD4P21917 467 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 ATP2B4P23634 1241 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 STAT1P42224 750 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 SLCO1A2P46721 670 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 CYP2J2P51589 502 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 PLS1Q14651 629 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 CBWD6Q4V339 395 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 CBWD3Q5JTY5 395 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 CBWD5Q5RIA9 395 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 RC3H1Q5TC82 1133 aaKnown RBP15.23■□□□□ 0.03
USH1C-201ENST00000005226 FAM228AQ86W67 206 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 CEP57Q86XR8 500 aa15.23■□□□□ 0.03
USH1C-201ENST00000005226 SLC30A5Q8TAD4 765 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms