RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Pabpc6Q9D4E6 643 aaKnown RBP16.36■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 SetQ9EQU5 289 aaKnown RBP16.36■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Akt3Q9WUA6 479 aa16.36■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Nek4Q9Z1J2 792 aa16.36■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Bscl2Q9Z2E9 383 aa16.36■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Gm6583E9Q8Z1 469 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Rnaseh1O70338 285 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 VcpQ01853 806 aaKnown RBP16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Trpc6Q61143 930 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Nr2e1Q64104 385 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Ntan1Q64311 310 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Krt9Q6RHW0 743 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Zbtb24Q80X44 710 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Cyth4Q80YW0 393 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Ncaph2Q8BSP2 607 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Bola3Q8CEI1 110 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Atf7Q8R0S1 413 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Uhrf1Q8VDF2 782 aaKnown RBP16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 NptxrQ99J85 493 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Fuca2Q99KR8 461 aa16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Dhx30Q99PU8 1217 aaKnown RBP16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Ccdc47Q9D024 483 aaKnown RBP16.35■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Gm11985A0A1B0GS61 206 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Pex10B1AUE5 324 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Ankrd34aB2RW11 495 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Pbx3O35317 434 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 PdgfbP31240 241 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Cd22P35329 862 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 RenbpP82343 430 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Myadml2Q08AU7 307 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Lmntd2Q0VET5 664 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Pbxip1Q3TVI8 727 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Gse1Q3U3C9 1213 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Tbc1d5Q80XQ2 815 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Dlg1Q811D0 905 aaKnown RBP16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Slc41a1Q8BJA2 512 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Metap1Q8BP48 386 aaKnown RBP16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Csnk1g3Q8C4X2 424 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Mettl24Q8CCB5 363 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Zc3h3Q8CHP0 950 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Pms1Q8K119 917 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 CrygnQ8VHL5 183 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Kctd10Q922M3 315 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Bbox1Q924Y0 387 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Akr1a1Q9JII6 325 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Ascl3Q9JJR7 174 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Lypla2Q9WTL7 231 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Arih2Q9Z1K6 492 aa16.34■□□□□ 0.21
Ccdc88c-204ENSMUST00000223097 Ccdc173A0JLY1 547 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Gna11P21278 359 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Dlg3P70175 849 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Irf3P70671 419 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Mars2Q499X9 586 aaKnown RBP16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Sun2Q8BJS4 731 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Gpr158Q8C419 1200 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Pak2Q8CIN4 524 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Rtn1Q8K0T0 780 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Mob2Q8VI63 235 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Ranbp17Q99NF8 1088 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Smc1aQ9CU62 1233 aaKnown RBP16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Tube1Q9D6T1 475 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Kcnq4Q9JK97 696 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Git2Q9JLQ2 708 aa16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Myh9Q8VDD5 1960 aaKnown RBP16.33■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 CenpfE9Q3P4 2997 aaKnown RBP16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Zfp213E9QAW0 468 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Tmem132bF7BAB2 1078 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Bcl7cO08664 217 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Celf6Q7TN33 460 aaKnown RBP16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Atp6v0d2Q80SY3 350 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Ercc6lQ8BHK9 1240 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 VmacQ8BP01 174 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Leng9Q8BTN6 485 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Jakmip1Q8BVL9 626 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Phldb2Q8K1N2 1249 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Plcd3Q8K2J0 785 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Acvr1cQ8K348 493 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Art3Q8R2G4 371 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 CenppQ9CZ92 286 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Noxred1Q9D3S5 366 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 IydQ9DCX8 285 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Rab27aQ9ERI2 221 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Fzd2Q9JIP6 570 aa16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Nup210Q9QY81 1886 aaKnown RBP16.32■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Wnt6P22727 364 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Ckap2Q3V1H1 664 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 PkdccQ5RJI4 492 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 EfsQ64355 560 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Krba1Q6NXZ1 1043 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Zbtb5Q7TQG0 670 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Olfr538Q7TRT5 310 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Atp6v0a4Q920R6 833 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Bicd2Q921C5 820 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Prpf3Q922U1 683 aaKnown RBP16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Med24Q99K74 987 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Atoh8Q99NA2 322 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 BcamQ9R069 622 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Mtmr1Q9Z2C4 669 aa16.31■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Abcb11Q9QY30 1321 aa16.3■□□□□ 0.2
Ccdc88c-204ENSMUST00000223097 Clk2O35491 499 aa16.3■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms