RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Cul4aQ3TCH7 759 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Eif3j1Q3UGC7 261 aaKnown RBP11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Tfcp2l1Q3UNW5 479 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Ncapg2Q6DFV1 1138 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Psmd5Q8BJY1 504 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Slc13a4Q8BZ82 625 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Btbd7Q8CFE5 1130 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Parp10Q8CIE4 960 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 OtoaQ8K561 1137 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 DaglbQ91WC9 669 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 CsadQ9DBE0 493 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Nup50Q9JIH2 466 aaKnown RBP11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Gm45194A0A140LJG2 572 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Heatr4E9Q357 955 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Guca2bO09051 106 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Znf367Q0VDT2 340 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Edem3Q2HXL6 931 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Map3k9Q3U1V8 1077 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Rapgef1Q3UHC1 1224 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 IgflQ6B9Z0 140 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Exoc3Q6KAR6 755 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 PicalmQ7M6Y3 660 aaKnown RBP11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Trappc12Q8K2L8 797 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Stard7Q8R1R3 373 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Calml4Q91WQ9 153 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Pcdhb12Q91Y07 789 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Dnajc14Q921R4 703 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Taf1dQ9D4V4 322 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 DonsonQ9QXP4 560 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Hebp1Q9R257 190 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Scgb2b12S4R2L0 112 aa11.08□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Pgap3A2A559 320 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Gimap9G3X987 291 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Gm10436L7N1Y3 520 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Serpinb8O08800 374 aaKnown RBP11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 UgcgO88693 394 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Gna15P30678 374 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Rps12P63323 132 aaKnown RBP11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Krt35Q497I4 455 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 AlcamQ61490 583 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 HrQ61645 1182 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Ppp1r13bQ62415 1087 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 SugctQ7TNE1 436 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Tbc1d22bQ80VE5 505 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Lrsam1Q80ZI6 727 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Bri3bpQ8BXV2 253 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Spire2Q8K1S6 718 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Arfgap2Q99K28 520 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Rassf3Q99P51 232 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Nxnl2Q9D531 156 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 SerhlQ9EPB5 311 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Tlr5Q9JLF7 859 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Trpc5Q9QX29 975 aa11.07□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Pagr1bF6V0H0 108 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Per1O35973 1291 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Atp9aO70228 1047 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Lrrc6O88978 473 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Lmnb2P21619 596 aaKnown RBP11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Tgfb2P27090 414 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Gtf2bP62915 316 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Pdlim7Q3TJD7 457 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Garem2Q6PAJ3 880 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Znf618Q80YY7 953 aaKnown RBP11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Slc9a9Q8BZ00 644 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Spata2Q8K004 515 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Znrd1-asQ8R0E5 213 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 TxlnbQ8VBT1 685 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Lman1lQ8VCD3 505 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Sh2b1Q91ZM2 756 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Pls3Q99K51 630 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Pagr1aQ99L02 253 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Dph6Q9CQ28 267 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Drap1Q9D6N5 205 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Ppil2Q9D787 521 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Prpf4Q9DAW6 521 aaKnown RBP11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Hyou1Q9JKR6 999 aaKnown RBP11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Gfpt2Q9Z2Z9 682 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 1700017N19RikA0A087WPJ1 469 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Tcp10bE9PYJ0 438 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Flot1O08917 428 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Folh1O35409 752 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 TyrobpO54885 114 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Xirp1O70373 1129 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 H2afzP0C0S6 128 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Irf8P23611 424 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 PltpP55065 493 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Polr2fP61219 127 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 H2afvQ3THW5 128 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Gm5935Q497S0 212 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Sycp1Q62209 993 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Tgoln2Q62314 363 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Zbtb7bQ64321 544 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Xpnpep1Q6P1B1 623 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Atg4cQ811C2 458 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Rapgef5Q8C0Q9 814 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 C8aQ8K182 587 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Matr3Q8K310 846 aaKnown RBP11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Klhl36Q8R124 613 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Nup58Q8R332 587 aa11.06□□□□□ -0.64
Cpsf3-211ENSMUST00000222968 Ube2sQ921J4 223 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms