RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 DgkkE9Q7N4 1118 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Snx14Q8BHY8 964 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Zkscan3Q91VW9 553 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ranbp17Q99NF8 1088 aa9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 NkapQ9D0F4 415 aaKnown RBP9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Eif4enif1Q9EST3 983 aaKnown RBP9.89□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Casp14O89094 257 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Fam167bP17257 162 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Q3TYL0 343 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Miga1Q4QQM5 600 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Anapc5Q8BTZ4 740 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Eif2ak3Q9Z2B5 1114 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Dnaaf5B9EJR8 853 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Vmn2r79E9Q067 851 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Pcyt1aP49586 367 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Pnma5Q5DTT8 618 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Caprin1Q60865 707 aaKnown RBP9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 PrimpolQ6P1E7 537 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 BC048507Q80ZS7 89 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Atp2a1Q8R429 994 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 MgarpQ8VI64 283 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 MajinQ9D992 256 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Vmn2r78K7N6U5 853 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 RubcnlQ3TD16 648 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ccdc40Q8BI79 1192 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 CalcbQ99MP3 130 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Myo1hQ9D6A1 958 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ephb4P54761 987 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 BC051142Q3V0M8 400 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Olfr121Q5CZY0 321 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Usp8Q80U87 1080 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Lrrc1Q80VQ1 524 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Zfp449Q8CB76 518 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Alpk1Q9CXB8 1231 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Rims2Q9EQZ7 1530 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Cyp11b2P15539 500 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Gjb6P70689 261 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Tmem109Q3UBX0 243 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Iqcb1Q8BP00 598 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Parp10Q8CIE4 960 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Abhd8Q8R0P8 439 aa9.88□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Rasgrf1P27671 1262 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ftl1P29391 183 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 VcpQ01853 806 aaKnown RBP9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Cct8l1Q80YT3 562 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Kcnv2Q8CFS6 562 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ppp4r1Q8K2V1 951 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 A430078G23RikE9Q7Y4 484 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Cacna2d1O08532 1103 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ppargc1aO70343 797 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Sept2P42208 361 aaKnown RBP9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Usp13Q5BKP2 858 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Fam183bQ5NC57 135 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Prl2c1Q5SVL9 228 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 SrlQ7TQ48 910 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Spata32Q8C5V0 334 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Leng8Q8CBY3 785 aaKnown RBP9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Sept12Q9D451 317 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Calr3Q9D9Q6 380 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Rtn3Q9ES97 964 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Rnf123Q5XPI3 1314 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Prss40A6H6T1 365 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Perm1Q149B8 807 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ccdc33Q3ULW6 985 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Bcap29Q61334 240 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Sp8Q8BMJ8 486 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Gbp5Q8CFB4 590 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Stx12Q9ER00 274 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Arhgef7Q9ES28 862 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Serpinb8O08800 374 aaKnown RBP9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Pde4aO89084 844 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Slc8a1P70414 970 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Serpinb6dQ3UWK8 375 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Znf496Q5SXI5 585 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Arhgap10Q6Y5D8 786 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 PolrmtQ8BKF1 1207 aaKnown RBP9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 H6pdQ8CFX1 789 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Lrrc14Q8VC16 493 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Txndc9Q9CQ79 226 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Sema4dO09126 861 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Lrrc4bP0C192 709 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 H2afxP27661 143 aaKnown RBP9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Kmt5aQ2YDW7 349 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Tatdn3Q3U1C6 294 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Fbxl21Q8BFZ4 434 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Serpina3bQ8BYY9 420 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Usp27Q8CEG8 438 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Kcnb2A6H8H5 907 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Olfr310B2RVZ1 332 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Nol4P60954 483 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 StamP70297 548 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Slfnl1Q8BHW9 410 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Slc26a6Q8CIW6 758 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ccdc65Q8VHI7 493 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Capn9Q9D805 690 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Nup50Q9JIH2 466 aaKnown RBP9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Ecel1Q9JMI0 775 aa9.87□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Gm21962L7N280 338 aa9.86□□□□□ -0.83
Scn8a-213ENSMUST00000201549 FosP01101 380 aa9.86□□□□□ -0.83
Scn8a-213ENSMUST00000201549 Dynlt1P51807 113 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms