RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 Upb1Q8VC97 393 aa13.59□□□□□ -0.23
Ccdc28a-203ENSMUST00000173243 Stk38Q91VJ4 465 aa13.59□□□□□ -0.23
Ccdc28a-203ENSMUST00000173243 PccaQ91ZA3 724 aa13.59□□□□□ -0.23
Ccdc28a-203ENSMUST00000173243 Cabp7Q91ZM8 215 aa13.59□□□□□ -0.23
Ccdc28a-203ENSMUST00000173243 Josd2Q9CR30 188 aa13.59□□□□□ -0.23
Ccdc28a-203ENSMUST00000173243 Mageb3Q9D2H4 330 aa13.59□□□□□ -0.23
Ccdc28a-203ENSMUST00000173243 Col4a3bpQ9EQG9 624 aa13.59□□□□□ -0.23
Ccdc28a-203ENSMUST00000173243 Pex3Q9QXY9 372 aa13.59□□□□□ -0.23
Ccdc28a-203ENSMUST00000173243 Hs6st3Q9QYK4 470 aa13.59□□□□□ -0.23
Ccdc28a-203ENSMUST00000173243 Gys1Q9Z1E4 738 aaKnown RBP13.59□□□□□ -0.23
Ccdc28a-203ENSMUST00000173243 Kank3Q9Z1P7 791 aa13.59□□□□□ -0.23
Ccdc28a-203ENSMUST00000173243 Cyp4a29A0A087WPC3 509 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Akr1c19G3X9Y6 323 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Aldh2P47738 519 aaKnown RBP13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Rnf19aP50636 840 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Ccr5P51682 354 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Pcbp1P60335 356 aaKnown RBP13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Bpifa6Q0VGU8 367 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Gse1Q3U3C9 1213 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Mpzl3Q3V3F6 237 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Drc7Q6V3W6 876 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Csrnp2Q8BGQ2 534 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Cdca8Q8BHX3 289 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Zfp120Q8BZW4 436 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 ClmnQ8C5W0 1052 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Sbk1Q8QZX0 417 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Krt79Q8VED5 531 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Prb1Q91X93 504 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Dqx1Q924H9 718 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 PorcnQ9JJJ7 461 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Taf1Q80UV9 1891 aa13.58□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Ttll8A4Q9F1 832 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 PotegA5H0M4 473 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Krt36B1AQ75 473 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Epb41l2O70318 988 aaKnown RBP13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Slc16a2O70324 545 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Surf1P09925 306 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Msh3P13705 1091 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Grin1P35438 938 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Tnni3P48787 211 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Drp2Q05AA6 957 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Col9a2Q07643 688 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Cdca2Q14B71 982 aaKnown RBP13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 E2f8Q58FA4 860 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Islr2Q5RKR3 745 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Mcm7Q61881 719 aaKnown RBP13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Crtc1Q68ED7 630 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Dusp11Q6NXK5 321 aaKnown RBP13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Nap1l3Q794H2 544 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Ush1gQ80T11 461 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Thap3Q8BJ25 218 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Smad3Q8BUN5 425 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Eml3Q8VC03 897 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Spred2Q924S7 410 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Mcoln1Q99J21 580 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Krt82Q99M74 516 aa13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Wdr46Q9Z0H1 622 aaKnown RBP13.57□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Gucy2dA0A0U1RPR8 1117 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Akap17bA2A3V1 959 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Krt78E9Q0F0 1068 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Gm4841E9QAA8 417 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Gm8909G3UXE9 396 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Atp2b1G5E829 1220 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Vmn2r71L7N2D8 855 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Arhgap6O54834 987 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Cer1O55233 272 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Kif3aP28741 701 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Wdr5P61965 334 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Mark2Q05512 776 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Tfdp1Q08639 410 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Sema5bQ60519 1093 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Trpc6Q61143 930 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Tcf12Q61286 706 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Exoc3Q6KAR6 755 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Nudt16Q6P3D0 195 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Znf653Q6YND2 615 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 HomezQ80W88 542 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Haus7Q8BKT8 364 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Kcnv1Q8BZN2 503 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Prpf31Q8CCF0 499 aaKnown RBP13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Ago3Q8CJF9 860 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Vps16Q920Q4 839 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Ccer1Q9CQL2 403 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Phtf1Q9QZ09 761 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Acot9Q9R0X4 439 aaKnown RBP13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Krt85Q9Z2T6 507 aa13.56□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Cul4bA2A432 970 aaKnown RBP13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Gm6133B2RY53 190 aa13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 SprtnG3X912 497 aa13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Idh1O88844 414 aaKnown RBP13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Etv6P97360 485 aa13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Scarf1Q5ND28 820 aa13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Tmem199Q5SYH2 208 aa13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 ChpfQ6IQX7 774 aa13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Pcdhb14Q6PB90 796 aa13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Smarca1Q6PGB8 1046 aa13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Dusp9Q7TNL7 452 aa13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Zdhhc14Q8BQQ1 489 aa13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 TraipQ8VIG6 470 aa13.55□□□□□ -0.24
Ccdc28a-203ENSMUST00000173243 Syt17Q920M7 470 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms