RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Gcnt1Q09324 428 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Rnf20Q5DTM8 973 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Tnni3kQ5GIG6 834 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Cd300aQ6SJQ0 318 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Sestd1Q80UK0 696 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Znf365Q8BG89 408 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Samm50Q8BGH2 469 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Nipa1Q8BHK1 323 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Slc15a5Q8CBB2 566 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Prkrip1Q9CWV6 186 aaKnown RBP9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Pabpc6Q9D4E6 643 aaKnown RBP9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Cyp2s1Q9DBX6 501 aa9.13□□□□□ -0.95
Trim40-203ENSMUST00000172711 Umodl1Q5DID3 1319 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Vmn2r55G3UWZ4 781 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Vmn2r53L7N473 806 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Pbx3O35317 434 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Pde6bP23440 856 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 IppP28575 584 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Ccr5P51682 354 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Lbx1P52955 282 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 CebpaP53566 359 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Pkp1P97350 728 aaKnown RBP9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Gm3414Q3TNU4 584 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Ttc9Q3V038 219 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Ckap2Q3V1H1 664 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Sgsm2Q80U12 1005 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Fbxo44Q8BK26 255 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Smc5Q8CG46 1101 aaKnown RBP9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Gpr153Q8K0Z9 631 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Gtf3c5Q8R2T8 520 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Ifih1Q8R5F7 1025 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Kctd10Q922M3 315 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Gadd45gip1Q9CR59 222 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Q9CYI0 393 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Saal1Q9D2C2 474 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Pes1Q9EQ61 584 aaKnown RBP9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Fbxo17Q9QZM8 286 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 DmdP11531 3678 aa9.12□□□□□ -0.95
Trim40-203ENSMUST00000172711 Gm3739L7N296 216 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Tmprss9P69525 1065 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Erbb2P70424 1256 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Mark2Q05512 776 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Drp2Q05AA6 957 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Nfe2Q07279 373 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Lmntd2Q0VET5 664 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Eif3j1Q3UGC7 261 aaKnown RBP9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Atp11bQ6DFW5 1175 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 4933409G03RikQ8C5U0 320 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 RtknQ8C6B2 564 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Ugt2b1Q8R084 529 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Calhm5Q8R100 309 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Dnajc28Q8VCE1 385 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Med24Q99K74 987 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Ranbp17Q99NF8 1088 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Tfr2Q9JKX3 798 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Msh5Q9QUM7 833 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Taf1Q80UV9 1891 aa9.11□□□□□ -0.95
Trim40-203ENSMUST00000172711 Fpr-rs4A4FUQ5 323 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 3110082J24RikF6Z6Z2 108 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Fgf18O89101 207 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Myadml2Q08AU7 307 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Hexim2Q3TVI4 313 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Rsph3aQ3UFY4 516 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Krt9Q6RHW0 743 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 1700010I14RikQ7TPG0 532 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 St18Q80TY4 1045 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Tbc1d5Q80XQ2 815 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Smarcal1Q8BJL0 910 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Trim47Q8C0E3 641 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Mrpl50Q8VDT9 159 aaKnown RBP9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Mob2Q8VI63 235 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 B4galt3Q91YY2 395 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Prpf3Q922U1 683 aaKnown RBP9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Pramel1Q99MW3 458 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 GatmQ9D964 423 aaKnown RBP9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Rsph3bQ9DA80 389 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Hip1rQ9JKY5 1068 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Lypla2Q9WTL7 231 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Arih2Q9Z1K6 492 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Adamts20P59511 1906 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Olfr663A0A1B0GSI9 319 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Dnai2A2AC93 623 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Fbxl16A2RT62 479 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Phox2bO35690 314 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Entpd2O55026 495 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Slc16a2O70324 545 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Ccl4P14097 92 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Pcif1P59114 706 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Cct2P80314 535 aaKnown RBP9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 DsppP97399 934 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Smpd1Q04519 627 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Upf3aQ3ULJ3 422 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Kpna1Q60960 538 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Map3k7Q62073 579 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Kiaa1841Q68FF0 718 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 FtoQ8BGW1 502 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 VmacQ8BP01 174 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Rps6kb1Q8BSK8 525 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 KyQ8C8H8 661 aa9.1□□□□□ -0.95
Trim40-203ENSMUST00000172711 Olfr1352Q8VGX5 309 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms