RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Ppp1r12bQ8BG95 976 aa17.17■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Trim32Q8CH72 655 aa17.17■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Zcchc18Q8VD24 393 aa17.17■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Tspan17Q9D7W4 270 aa17.17■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Dusp10Q9ESS0 483 aa17.17■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Mcf2A2AEU1 1111 aa17.17■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Zmym1Q3TJB1 983 aa17.17■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Tmed8Q3UHI4 326 aa17.17■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Tpd52Q62393 224 aa17.17■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Mettl7bQ9DD20 244 aa17.17■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 EsrraO08580 422 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 OatP29758 439 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Wdr36Q3TAQ9 899 aaKnown RBP17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Mysm1Q69Z66 819 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Dnajc8Q6NZB0 253 aaKnown RBP17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 EcsitQ9QZH6 435 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Mst1rQ62190 1378 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Slurp2P0DP59 97 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Cyp2e1Q05421 493 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Mapk6Q61532 720 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Them5Q9CQJ0 248 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Snx24Q9CRB0 169 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 SmapQ9R0P4 181 aaKnown RBP17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 PapolbQ9WVP6 641 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 CtshP49935 333 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Taf1bP97358 586 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Ccdc159Q8C963 411 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Gimap4Q99JY3 219 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 MaddQ80U28 1577 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Mmrn2A6H6E2 943 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Adssl1P28650 457 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Slc9a1Q61165 820 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Q80ZQ3 298 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Scfd2Q8BTY8 684 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 ArpinQ9D0A3 226 aa17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Orc1Q9Z1N2 840 aaKnown RBP17.16■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Krt28A6BLY7 462 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Rbp3P49194 1234 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Mettl17Q3U2U7 461 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Atg16l1Q8C0J2 607 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Prpf31Q8CCF0 499 aaKnown RBP17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Cyp3a59D3Z2W7 503 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Lig1P37913 916 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Adgrg6Q6F3F9 1165 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Atp6v0d2Q80SY3 350 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 CoblQ5NBX1 1337 aaKnown RBP17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Gm3893E9Q1I1 302 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Usp17lbE9Q9U0 468 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Rtel1Q0VGM9 1203 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Skap2Q3UND0 358 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Ccdc50Q810U5 305 aaKnown RBP17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Dars2Q8BIP0 653 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Calr3Q9D9Q6 380 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Ccdc97Q9DBT3 340 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Orc3Q9JK30 715 aaKnown RBP17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Pik3c2bE9QAN8 1632 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Zc3h18Q0P678 948 aaKnown RBP17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Tcp10aQ80W76 438 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Vmn1r213Q8R278 384 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Chmp2aQ9DB34 222 aa17.15■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Gbp10Q000W5 611 aa17.14■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 HelqQ2VPA6 1069 aa17.14■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Ces1eQ64176 562 aa17.14■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Cdk5rap3Q99LM2 503 aa17.14■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Grtp1Q9D3N8 359 aa17.14■□□□□ 0.34
Pcdh1-203ENSMUST00000160721 Serpinb3dQ6UKZ0 387 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Clec4gQ8BNX1 294 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Ero1aQ8R180 464 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Tspyl4Q8VD63 406 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Ccdc70Q9D9B0 223 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Pfdn6Q03958 127 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Ect2Q07139 913 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Itih3Q61704 889 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 TwistnbQ78WZ7 330 aaKnown RBP17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Acat1Q8QZT1 424 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Gm29133A0A1B0GT72 266 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 DffaO54786 331 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Lrch1P62046 709 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Dpcr1Q3TNW5 500 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Carmil2Q3V3V9 1296 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 RimklbQ80WS1 387 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Map10Q8BJS7 891 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Gpr150Q8BL07 427 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 4932411N23RikQ8C0S0 470 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Fam161bQ8CB59 589 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Sucla2Q9Z2I9 463 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 C87977A2A958 498 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 A630010A05RikA9C473 232 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Pdha1P35486 390 aaKnown RBP17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Syt2P46097 422 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Sorbs1Q62417 1290 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Ece2Q80Z60 881 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Prpsap2Q8R574 369 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Nrbf2Q8VCQ3 287 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Ccdc65Q8VHI7 493 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Slc44a4Q91VA1 707 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Dtnbp1Q91WZ8 352 aa17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Rrp1bQ91YK2 724 aaKnown RBP17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Prpf6Q91YR7 941 aaKnown RBP17.14■□□□□ 0.33
Pcdh1-203ENSMUST00000160721 Gm6657A0A1B0GRJ3 277 aa17.13■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms