RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Phf20Q8BLG0 1010 aaKnown RBP12.14□□□□□ -0.47
Trim9-202ENSMUST00000110522 Cdc26Q99JP4 85 aa12.14□□□□□ -0.47
Trim9-202ENSMUST00000110522 YwhabQ9CQV8 246 aaKnown RBP12.14□□□□□ -0.47
Trim9-202ENSMUST00000110522 Gm8994E9PV04 411 aaKnown RBP12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Gm10436L7N1Y3 520 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 CraddO88843 199 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 AgtP11859 477 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 AlcamQ61490 583 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Atg4cQ811C2 458 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 MymkQ9D1N4 221 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Orc1Q9Z1N2 840 aaKnown RBP12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 AtrnQ9WU60 1428 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Lrrc38A2VDH3 298 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Wnt7aP24383 349 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Cnot7Q60809 285 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Med24Q99K74 987 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Rnaseh2aQ9CWY8 301 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Rnf6Q9DBU5 667 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 RictorQ6QI06 1708 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Rfpl4bJ3QPR6 266 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Lrrc4bP0C192 709 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Lrch2Q3UMG5 773 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Rhox12Q4TU81 186 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Atp13a3Q5XF89 1219 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 CtifQ6PEE2 600 aaKnown RBP12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Phf20l1Q8CCJ9 1013 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 CactinQ9CS00 772 aaKnown RBP12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Extl2Q9ES89 330 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Nudt5Q9JKX6 218 aa12.13□□□□□ -0.47
Trim9-202ENSMUST00000110522 Capn2O08529 700 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 EregQ61521 162 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 6820408C15RikQ8BJX2 354 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Ago4Q8CJF8 861 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Pop1Q8K205 1045 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Caln1Q9JJG7 219 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Trove2O08848 538 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Fgd3O88842 733 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Lrrc6O88978 473 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Frmd8Q3UFK8 466 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Ces1eQ64176 562 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Arhgap10Q6Y5D8 786 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Mtfr1lQ9CWE0 289 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Strn3Q9ERG2 796 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Tmod3Q9JHJ0 352 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Klra17Q9JMA4 273 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Ttll10A4Q9F3 704 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Ccnyl1D3YUJ3 367 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Sema3fO88632 785 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 RenbpP82343 430 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 GmpsQ3THK7 693 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Palb2Q3U0P1 1104 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Dzip3Q7TPV2 1204 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Q80ZQ3 298 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Znf365Q8BG89 408 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Nr3c2Q8VII8 978 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Polr3fQ921X6 316 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Bcs1lQ9CZP5 418 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 MlklQ9D2Y4 472 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Mss51Q9D5Z5 446 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 3830403N18RikQ9D6C3 208 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Kcnh7Q9ER47 1195 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Psmg1Q9JK23 289 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Sgk1Q9WVC6 431 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Nova2D3YVV7 556 aaKnown RBP12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Mboat4P0C7A3 435 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Rps6P62754 249 aaKnown RBP12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Shc3Q61120 474 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 EsrrbQ61539 433 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Nemp2Q8CB65 421 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Vcpip1Q8CDG3 1220 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Reep2Q8VCD6 254 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Olfr397Q8VEZ6 315 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Chn1Q91V57 459 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Pomgnt1Q91X88 660 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 Gyg1Q9R062 333 aa12.12□□□□□ -0.47
Trim9-202ENSMUST00000110522 CopeO89079 308 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Ankrd45Q810N6 248 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Mmtag2Q99LX5 260 aaKnown RBP12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Gkap1Q9JMB0 366 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Pcsk1nQ9QXV0 258 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Adam22Q9R1V6 904 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Gadd45gQ9Z111 159 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Ccdc13D3YV10 709 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Becn2P0DM65 447 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Psmc6P62334 389 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Wdr44Q6NVE8 915 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 OcrlQ6NVF0 900 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Ccdc15Q8C9M2 810 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Chmp2aQ9DB34 222 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Ctnnd1P30999 938 aaKnown RBP12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Calhm6Q8C9E8 313 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 LgsnQ8CIX8 563 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Taf12Q8VE65 161 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Smc6Q924W5 1097 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Spata17Q9D552 379 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 PpihQ9D868 188 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Ppp2r3dQ9Z176 491 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Mtmr1Q9Z2C4 669 aa12.11□□□□□ -0.47
Trim9-202ENSMUST00000110522 Clcn6O35454 870 aa12.1□□□□□ -0.47
Trim9-202ENSMUST00000110522 Cbfa2t2O70374 594 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms