RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Usp15Q8R5H1 981 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ces1dQ8VCT4 565 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cib4Q9D9N5 185 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Pold3Q9EQ28 462 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Atp11cQ9QZW0 1129 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 C130060K24RikG3UWA8 416 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ptk2P34152 1090 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cacnb3P54285 484 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Drp2Q05AA6 957 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ipo11Q8K2V6 975 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 AmotQ8VHG2 1126 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Znf654Q9DAU9 571 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Gpatch8A2A6A1 1505 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Znf711A2ANX9 761 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Spata31E9QAF0 1014 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Aco1P28271 889 aaKnown RBP16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Tsc22d1P62500 1077 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Pcdhb14Q6PB90 796 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 4933409G03RikQ8C5U0 320 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ddx39bQ9Z1N5 428 aaKnown RBP16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 NfkbibQ60778 359 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Eps15l1Q60902 907 aaKnown RBP16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Best2Q8BGM5 508 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Abraxas1Q8BPZ8 407 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cpa5Q8R4H4 436 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Pgm1Q9D0F9 562 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Shcbp1Q9Z179 668 aa16.11■□□□□ 0.17
Chd3-201ENSMUST00000092971 Pde8bE9Q4S1 865 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cd3dP04235 173 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Gm3414Q3TNU4 584 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Pramel6Q810Y9 485 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 PolrmtQ8BKF1 1207 aaKnown RBP16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Osbpl6Q8BXR9 959 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Sulf1Q8K007 870 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Vmp1Q99KU0 406 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Aff4Q9ESC8 1160 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 ErmapQ9JLN5 566 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Krt4P07744 525 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Dab1P97318 588 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Epas1P97481 874 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 E330034G19RikQ3UWX6 351 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Rtl3Q6P1Y1 553 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Pabpc4Q6PHQ9 660 aaKnown RBP16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Sap130Q8BIH0 1057 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Arfip2Q8K221 341 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 NclnQ8VCM8 563 aaKnown RBP16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Tex21Q9R0U9 575 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Gm9992B2RWK3 458 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Unc93aQ710D3 458 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ttll4Q80UG8 1193 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Pomgnt2Q8BW41 605 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Fuca2Q99KR8 461 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Trmt44Q9D2Q2 713 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Sun1Q9D666 913 aaKnown RBP16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Hic2Q9JLZ6 619 aaKnown RBP16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ttc41Q692V3 1318 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Gm43638A0A0J9YU36 694 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Prss51A0A286YDY8 319 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Rps6P62754 249 aaKnown RBP16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Nab2Q61127 525 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ap2b1Q9DBG3 937 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 EtfbQ9DCW4 255 aaKnown RBP16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cpb2Q9JHH6 422 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Syndig1A2ANU3 258 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Mup5P11591 180 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Idi1P58044 227 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Coq7P97478 217 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Map3k10Q66L42 940 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cap2Q9CYT6 476 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Rbm31yQ9D3U4 565 aa16.1■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cct7P80313 544 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ces5aQ6AW46 575 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Zbtb40Q6PCS8 1258 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Q80Y73 168 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Mfap3lQ9D3X9 409 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 L3mbtl1A2A5N8 826 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Sik2Q8CFH6 931 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Pabpc6Q9D4E6 643 aaKnown RBP16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Chit1Q9D7Q1 464 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Cul1Q9WTX6 776 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Sucla2Q9Z2I9 463 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Adcy9P51830 1353 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Gm3127E9Q9P5 263 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Gm3453K7N724 263 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Champ1Q8K327 802 aaKnown RBP16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Disp3A3KFU9 1347 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Ccdc127Q3TC33 260 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Znf827Q505G8 1078 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Washc5Q8C2E7 1159 aaKnown RBP16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Lrrc59Q922Q8 307 aaKnown RBP16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 4931423N10RikQ9D4J9 382 aa16.09■□□□□ 0.17
Chd3-201ENSMUST00000092971 Usp10P52479 792 aaKnown RBP16.08■□□□□ 0.17
Chd3-201ENSMUST00000092971 Faf2Q3TDN2 445 aa16.08■□□□□ 0.17
Chd3-201ENSMUST00000092971 Q8CEZ4 452 aa16.08■□□□□ 0.17
Chd3-201ENSMUST00000092971 Vmn1r191Q8K4D0 298 aa16.08■□□□□ 0.17
Chd3-201ENSMUST00000092971 TarsQ9D0R2 722 aaKnown RBP16.08■□□□□ 0.17
Chd3-201ENSMUST00000092971 PpargP37238 505 aa16.08■□□□□ 0.17
Chd3-201ENSMUST00000092971 Arhgef7Q9ES28 862 aa16.08■□□□□ 0.17
Chd3-201ENSMUST00000092971 Krt1P04104 637 aa16.08■□□□□ 0.16
Chd3-201ENSMUST00000092971 Rab3ipQ68EF0 428 aa16.08■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms