RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Lrrn2Q6PHP6 730 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ccdc93Q7TQK5 629 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Kbtbd13Q8C828 458 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Zbtb8bQ8CII0 484 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 MyripQ8K3I4 856 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ccdc80Q8R2G6 949 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ccdc43Q9CR29 222 aaKnown RBP12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Galnt15Q9D2N8 638 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ccdc83Q9D4V3 305 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 IydQ9DCX8 285 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Trpc5Q9QX29 975 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Phtf1Q9QZ09 761 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ttc6G3UYY4 1857 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Hnrnph1O35737 449 aaKnown RBP12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Kcnma1Q08460 1209 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 ItpripQ3TNL8 555 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Gas7Q60780 421 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Scaf8Q6DID3 1268 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Tlr13Q6R5N8 991 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Cdc23Q8BGZ4 597 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Dclk3Q8BWQ5 790 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ppfibp1Q8C8U0 969 aaKnown RBP12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ccdc159Q8C963 411 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Rbm41Q8JZV4 413 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Eva1bQ8K2Y3 164 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Abcg4Q91WA9 646 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Smtnl1Q99LM3 459 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Mrfap1Q9CQL7 125 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Tjp3Q9QXY1 905 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Slc12a7Q9WVL3 1083 aa12.35□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ttc38A3KMP2 465 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Cpb1B2RS76 415 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Nova2D3YVV7 556 aaKnown RBP12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Vmn2r78K7N6U5 853 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Zfp953Q3UPV7 304 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Brd9Q3UQU0 596 aaKnown RBP12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Tmem132dQ76HP3 1097 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Snapc2Q91XA5 359 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Slc25a38Q91XD8 326 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Rrp1bQ91YK2 724 aaKnown RBP12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Plagl2Q925T4 496 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Lpin2Q99PI5 893 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 PpihQ9D868 188 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Eif3fQ9DCH4 361 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Sec14l1A8Y5H7 715 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ube3aO08759 870 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 PurbO35295 324 aaKnown RBP12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Bace1P56818 501 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Actn4P57780 912 aaKnown RBP12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Traf5P70191 558 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Krt74Q6IFZ9 495 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Tsga10Q6NY15 697 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ube2q1Q7TSS2 422 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ddx10Q80Y44 875 aaKnown RBP12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Ccdc113Q8C5T8 377 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Sash3Q8K352 380 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Stap2Q8R0L1 411 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 CrygnQ8VHL5 183 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Atp5c1Q91VR2 298 aaKnown RBP12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Srgap2Q91Z67 1071 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Cdca7Q9D0M2 382 aa12.34□□□□□ -0.43
Ddx55-201ENSMUST00000071057 Scarf1Q5ND28 820 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Wdr3Q8BHB4 942 aaKnown RBP12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Znrd1-asQ8R0E5 213 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Rpap2Q8VC34 614 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Eif4a3Q91VC3 411 aaKnown RBP12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 PccaQ91ZA3 724 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Pstpip2Q99M15 334 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 MicalclQ9D5U9 680 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tgm5Q9D7I9 724 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Arhgef7Q9ES28 862 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Extl2Q9ES89 330 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Plscr1Q9JJ00 328 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Klra17Q9JMA4 273 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Rsrc2A2RTL5 376 aaKnown RBP12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Nfxl1E9Q8I7 918 aaKnown RBP12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Nedd9O35177 833 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Fgd3O88842 733 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Hnrnph2P70333 449 aaKnown RBP12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tcerg1lQ3B807 590 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Map9Q3TRR0 646 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ankrd13cQ3UX43 541 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 MaeaQ4VC33 396 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Cep112Q5PR68 954 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Cacna2d4Q5RJF7 1116 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Kif5bQ61768 963 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Sema4bQ62179 823 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Mysm1Q69Z66 819 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Rhbdf1Q6PIX5 856 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tmc3Q7TQ69 1130 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Nr3c2Q8VII8 978 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Mettl16Q9CQG2 553 aaKnown RBP12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Lypla2Q9WTL7 231 aa12.33□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Cetn3O35648 167 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Nmt1O70310 496 aaKnown RBP12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Ano9P86044 747 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Tcp11Q01755 566 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Dcaf17Q3TUL7 519 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 MmeQ61391 750 aa12.32□□□□□ -0.44
Ddx55-201ENSMUST00000071057 Nlrp4fQ66X05 959 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms