RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Setd1aE9PYH6 1716 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Zc3h13E9Q784 1729 aaKnown RBP9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 BC034090A0A087WP46 1202 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Rhox3cA2AWM0 215 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Cntnap3E9PY62 1287 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Acbd4E9Q289 327 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Pcdh1F7BJK1 1077 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Itgb1P09055 798 aaKnown RBP9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Sstr3P30935 428 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Sycp3P70281 254 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Aup1P70295 410 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 HelqQ2VPA6 1069 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Eif1adQ3THJ3 170 aaKnown RBP9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Lrrfip1Q3UZ39 729 aaKnown RBP9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Slc6a3Q61327 619 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Zzz3Q6KAQ7 910 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Kdm1aQ6ZQ88 853 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Kcnk12Q76M80 430 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 TbataQ7TSD4 393 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Otop2Q80SX5 563 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Fam168aQ8BGZ2 244 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Neto2Q8BNJ6 525 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Ephb1Q8CBF3 984 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Dlk2Q8K1E3 382 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Calhm5Q8R100 309 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Sesn3Q9CYP7 492 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Mdm1Q9D067 708 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Tsc1Q9EP53 1161 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Insm2Q9JMC2 493 aa9.06□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Ttll5Q8CHB8 1328 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Tecpr2Q3UH45 1423 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 PplQ9R269 1755 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Gm10717D3Z1I8 228 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Adamts3E9Q287 1204 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Bin1O08539 588 aaKnown RBP9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Cd84Q18PI6 329 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Chpf2Q3UU43 768 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Cdc14bQ6PFY9 485 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Pdcl3Q8BVF2 240 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Gripap1Q8VD04 806 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Q91WD4 421 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 IcmtQ9EQK7 283 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Slc25a10Q9QZD8 287 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Abca8aQ8K442 1620 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Efcab6Q6P1E8 1516 aa9.05□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Tubgcp6G5E8P0 1769 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Gli3Q61602 1583 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Zfp174B9EJW5 407 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Adamts6D3Z1A5 1117 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 PbsnO08976 174 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Srsf3P84104 164 aaKnown RBP9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Togaram2Q3TYG6 1002 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Brsk2Q69Z98 735 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Megf10Q6DIB5 1147 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Olfr1251Q7TQZ3 318 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Q8C5K5 320 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Epc1Q8C9X6 813 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Krtap31-2Q8CAY5 177 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Mlc1Q8VHK5 382 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 P2rx7Q9Z1M0 595 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Eif2ak4Q9QZ05 1648 aa9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Gemin5Q8BX17 1502 aaKnown RBP9.04□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 DroshaQ5HZJ0 1373 aaKnown RBP9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Slfn3A0A1L1STQ7 640 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Rgs22G3UYX5 1258 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Egr1P08046 533 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Wbp1P97764 304 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Q3TYL0 343 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Uimc1Q5U5Q9 727 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Zbed4Q80WQ9 1168 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Ctxn3Q8BXZ0 80 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Zc3h6Q8BYK8 1177 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Vmn1r87Q8R255 295 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Tut1Q8R3F9 869 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Gorasp1Q91X51 446 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Lims2Q91XD2 341 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 PgdQ9DCD0 483 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 TrehQ9JLT2 576 aa9.03□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Myo3aQ8K3H5 1613 aa9.02□□□□□ -0.96
Ccdc54-201ENSMUST00000062439 Evi5lH3BKQ3 813 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Axin2O88566 840 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Kcnj5P48545 419 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Spdye4aQ5IBH6 268 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Hoxa13Q62424 386 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Zc3hav1lQ8BFR1 296 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Lrrtm3Q8BZ81 582 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Commd10Q8JZY2 202 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Alyref2Q9JJW6 218 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Acss2Q9QXG4 701 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Tk2Q9R088 270 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Naip7Q9JIB3 1402 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Nrxn3Q6P9K9 1571 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Atp7aQ64430 1491 aa9.02□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Gm11237F2Z3W5 360 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Gm11238F2Z478 360 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Gm11236J3QMS7 360 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Gm21738J3QP72 227 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 GzmkO35205 263 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 Magea6O89010 325 aa9.01□□□□□ -0.97
Ccdc54-201ENSMUST00000062439 PlauP06869 433 aa9.01□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms