RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Cntnap1O54991 1385 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Rtl9Q32KG4 1339 aa12.45□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Palm3A2TJV2 734 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Stag2O35638 1231 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 1810065E05RikQ5NC41 235 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Pde1aQ61481 565 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Lilrb4Q64281 335 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Kiaa1328Q6NZK5 612 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Spata24Q6P926 205 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Tspan18Q80WR1 248 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Tmem179Q8BHH9 233 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Apobec3Q99J72 440 aaKnown RBP12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Taf11Q99JX1 211 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 NenfQ9CQ45 171 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Txndc9Q9CQ79 226 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Slfn1Q9Z0I7 337 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Znf638Q61464 1960 aaKnown RBP12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Pabpc1lA2A5N3 607 aaKnown RBP12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gm1141B9EJU1 475 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Cdk2ap1O35207 114 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ftl1P29391 183 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Zc3h18Q0P678 948 aaKnown RBP12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 HnrnpdQ60668 355 aaKnown RBP12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Madcam1Q61826 405 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Tacc1Q6Y685 774 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Usp8Q80U87 1080 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 LnpepQ8C129 1025 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Tmco1Q921L3 188 aaKnown RBP12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Arl2bpQ9D385 163 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 IqcdQ9D3V1 458 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 PygmQ9WUB3 842 aaKnown RBP12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gabbr1Q9WV18 960 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Aox3G3X982 1335 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Pex5O09012 639 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Tcp1P11983 556 aaKnown RBP12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ptpn12P35831 775 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Trim43aQ3TL54 445 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Dzip1lQ499E4 774 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Glg1Q61543 1175 aaKnown RBP12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ces1eQ64176 562 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Krt77Q6IFZ6 572 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Epha10Q8BYG9 1007 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Pcolce2Q8R4W6 414 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Nmd3Q99L48 503 aaKnown RBP12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Tmem53Q9D0Z3 276 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Krtap5-3Q9D226 196 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Fip1l1Q9D824 581 aaKnown RBP12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Sgf29Q9DA08 293 aaKnown RBP12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gpaa1Q9WTK3 621 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Epb41l3Q9WV92 929 aa12.44□□□□□ -0.42
Sdc1-201ENSMUST00000020911 R3hdm1E9Q9Q2 1135 aaKnown RBP12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Dync1i2O88487 612 aaKnown RBP12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Fen1P39749 378 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Zdhhc13Q9CWU2 622 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Batf3Q9D275 118 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gtf2iQ9ESZ8 998 aaKnown RBP12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Acad12D3Z7X0 555 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Cyp3a25O09158 503 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gjc1P28229 396 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Kcnk18Q6VV64 394 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Foxo6Q70KY4 559 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ckap2lQ7TS74 745 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 C2cd2lQ80X80 706 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 SltmQ8CH25 1031 aaKnown RBP12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Haus8Q99L00 373 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Klf15Q9EPW2 415 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Tob2Q9JM55 345 aa12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Nup98Q6PFD9 1816 aaKnown RBP12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Myh10Q61879 1976 aaKnown RBP12.43□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Atxn10P28658 475 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Serping1P97290 504 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 VrtnQ3SYK4 740 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Kiaa0319Q5SZV5 1081 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Pim2Q62070 370 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Foxb2Q64733 428 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Adam6bQ6IMH7 756 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Psd2Q6P1I6 770 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Strip1Q8C079 837 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gstm4Q8R5I6 218 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Apopt1Q9CQW7 192 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Tex9Q9D845 387 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Klra17Q9JMA4 273 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ddx25Q9QY15 484 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ror2Q9Z138 944 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Ano3A2AHL1 981 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Nfxl1E9Q8I7 918 aaKnown RBP12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gucy1a2F8VQK3 730 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gm3383J3QQ59 259 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gm3164L7N2B9 238 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Gm3239L7N2D9 227 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Grpel2O88396 224 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Rps6ka1P18653 724 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Dnm2P39054 870 aaKnown RBP12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Rcn1Q05186 325 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Chrna5Q2MKA5 467 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Znf667Q2TL60 609 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Fam8a1Q3URQ4 399 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Cage1Q5IR70 849 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Haus1Q8BHX1 278 aa12.42□□□□□ -0.42
Sdc1-201ENSMUST00000020911 Lrrd1Q8C0R9 853 aa12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms