RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Usp50Q6P8X6 390 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Galnt17Q7TT15 598 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Sept9Q80UG5 583 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 NkrfQ8BY02 690 aaKnown RBP13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Exd1Q8CDF7 570 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Shtn1Q8K2Q9 631 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Olfr805Q8VFI4 319 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Creb3l3Q91XE9 479 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Q91Z58 1206 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Stx17Q9D0I4 301 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Cep72Q9D3R3 646 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 4933428M09RikQ9D3X3 192 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ccdc91Q9D8L5 442 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Gm28036V9GXJ1 658 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Sh3tc1G3X9F6 1346 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Prss40A6H6T1 365 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Zscan18E9PUD6 809 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Apol10bG3X9K7 334 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Mucl2P02815 138 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 H2afzP0C0S6 128 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Cxcr2P35343 359 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Tcerg1lQ3B807 590 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 H2afvQ3THW5 128 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Luc7l3Q5SUF2 432 aaKnown RBP13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rap1gap2Q5SVL6 712 aaKnown RBP13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Mea1Q64327 174 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Q8BGC1 442 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ift74Q8BKE9 600 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rasgrp4Q8BTM9 673 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rccd1Q8BTU7 377 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Agap1Q8BXK8 857 aaKnown RBP13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Dclre1bQ8C7W7 541 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Znf445Q8R2V3 986 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 1700018B08RikQ9DA83 213 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Sept14Q9DA97 430 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Tmem174Q9DCX7 243 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Zfp831A2ADM8 1628 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Gm5936A2BG95 728 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Gm5640A3KG49 728 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Mmrn1B2RPV6 1210 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Vmn2r79E9Q067 851 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Zfp212G3X8R7 492 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Xrcc6P23475 608 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Pon1P52430 355 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 NcstnP57716 708 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Sem1P60897 70 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Dpcr1Q3TNW5 500 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Drc1Q3USS3 753 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Nsrp1Q5NCR9 542 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Tbc1d1Q60949 1255 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 XiapQ60989 496 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Gbp4Q61107 620 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 L3mbtl3Q8BLB7 883 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Slc39a11Q8BWY7 342 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Lrrc4cQ8C031 640 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Pih1h3bQ8C6P5 218 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 GanQ8CA72 597 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Kremen1Q99N43 473 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Llcfc1Q9D9P8 108 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 ParvgQ9ERD8 331 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 IvdQ9JHI5 424 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Tex21Q9R0U9 575 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Gja10Q9WUS4 505 aa13.07□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Adgra3Q7TT36 1310 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Pabpc1lA2A5N3 607 aaKnown RBP13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Spocd1B1ASB6 936 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Samd15F6XZJ7 620 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Kcna1P16388 495 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ptpn12P35831 775 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Plk4Q64702 925 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ttyh3Q6P5F7 524 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ankrd13aQ80UP5 588 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Epha10Q8BYG9 1007 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Tut1Q8R3F9 869 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Cbwd1Q8VEH6 393 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Chn1Q91V57 459 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Sgf29Q9DA08 293 aaKnown RBP13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ddx25Q9QY15 484 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Irs4Q9Z0Y7 1216 aa13.06□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Mms22lB1AUR6 1238 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 DgkiD3YWQ0 1071 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Kcnh2O35219 1162 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Csf1rP09581 977 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Gna14P30677 355 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Gna15P30678 374 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Cops2P61202 443 aaKnown RBP13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Lrch1P62046 709 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Trim43cP86449 446 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Znf367Q0VDT2 340 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Trim80Q3V061 624 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Krt35Q497I4 455 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Zdhhc18Q5Y5T2 380 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Tspyl5Q69ZB3 406 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rexo1Q7TT28 1213 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 PpatQ8CIH9 517 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Lrrc41Q8K1C9 807 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Nup133Q8R0G9 1155 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rpa1Q8VEE4 623 aaKnown RBP13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Trim66Q924W6 1242 aa13.05□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Sh3bp5lQ99LH9 392 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms