RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Dr1Q91WV0 176 aa20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Drap1Q9D6N5 205 aa20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Myoz2Q9JJW5 264 aa20.37■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Klhdc7aA2APT9 773 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Gm14525B1AZA0 212 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Gm2012B1B0R1 212 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Ccdc78D3Z5T1 437 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Sema6bO54951 886 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Trip13Q3UA06 432 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Znf652Q5DU09 608 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Gm14819Q62478 212 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Ttc16Q8C1F5 767 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Plcg2Q8CIH5 1265 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Apbb1ipQ8R5A3 670 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Tsnaxip1Q99P25 704 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Q9DAQ4 598 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Uchl3Q9JKB1 230 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Kiaa1522A2A7S8 1013 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Hspa1lP16627 641 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Serpina1bP22599 413 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Ctnna1P26231 906 aaKnown RBP20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 AaasP58742 546 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Spata18Q0P557 537 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Swap70Q6A028 585 aaKnown RBP20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 E2f7Q6S7F2 904 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Rps6ka6Q7TPS0 764 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Celf4Q7TSY6 486 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 PaoxQ8C0L6 504 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 PpatQ8CIH9 517 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Zkscan3Q91VW9 553 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 KynuQ9CXF0 464 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Grtp1Q9D3N8 359 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Rabl3Q9D4V7 236 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Prkab1Q9R078 270 aa20.36■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Fam205aA2APU8 1308 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Trim55G3X8Y1 545 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Gm6121L7MUF1 212 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 DtnbO70585 659 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Fgfr4Q03142 799 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Kiaa0319Q5SZV5 1081 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Gga2Q6P5E6 603 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Snx14Q8BHY8 964 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Scfd2Q8BTY8 684 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Vps52Q8C754 723 aaKnown RBP20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Ebag9Q9D0V7 213 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Frmpd3A0A140LIW3 1774 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Kmt2eQ3UG20 1868 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Zfp174B9EJW5 407 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Samd15F6XZJ7 620 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Flt3Q00342 1000 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Ncf1Q09014 390 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 YdjcQ14BV6 310 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Slc30a9Q5IRJ6 567 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Lilrb4Q64281 335 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Tspyl5Q69ZB3 406 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Ehbp1Q69ZW3 1231 aa20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Peg10Q7TN75 958 aaKnown RBP20.35■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Gm45261A0A1B0GSP6 197 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Gm10110D3Z5M2 615 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Barx2O08686 283 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Kiaa1211Q5PR69 1207 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Arhgap44Q5SSM3 814 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Ppp2r5cQ60996 524 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Nr2e1Q64104 385 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 AdalQ80SY6 360 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Tbx22Q8K402 517 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Slc12a6Q924N4 1150 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Dhx58Q99J87 678 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Klc4Q9DBS5 619 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Stk4Q9JI11 487 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Sclt1G5E861 688 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Ncf2O70145 525 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Gdap1O88741 358 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Tigd5Q499M4 642 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Fgd5Q80UZ0 1219 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 E330017A01RikQ8BU47 192 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Yars2Q8BYL4 472 aaKnown RBP20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Ccdc15Q8C9M2 810 aa20.34■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Psme4Q5SSW2 1843 aa20.33■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Slc27a3O88561 667 aa20.33■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Tatdn3Q3U1C6 294 aa20.33■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 FtoQ8BGW1 502 aa20.33■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Mrpl11Q9CQF0 192 aaKnown RBP20.33■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Llcfc1Q9D9P8 108 aa20.33■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Gkap1Q9JMB0 366 aa20.33■□□□□ 0.85
Shkbp1-201ENSMUST00000003857 Wdr72D3YYM4 1114 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 CraddO88843 199 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Frmd8Q3UFK8 466 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Erlin2Q8BFZ9 340 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ctnnbl1Q9CWL8 563 aaKnown RBP20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Hebp1Q9R257 190 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Btaf1E9QAE3 1848 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Cntnap1O54991 1385 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Clcn6O35454 870 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Wdr44Q6NVE8 915 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ddx31Q6NZQ2 687 aaKnown RBP20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Ppp2r5aQ6PD03 486 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Cyp26b1Q811W2 512 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Cnot10Q8BH15 744 aa20.32■□□□□ 0.84
Shkbp1-201ENSMUST00000003857 Epn2Q8CHU3 595 aa20.32■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms