RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 4931423N10RikQ9D4J9 382 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Phtf1Q9QZ09 761 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Smchd1Q6P5D8 2007 aaKnown RBP17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 R3hdm1E9Q9Q2 1135 aaKnown RBP17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Agxt2Q3UEG6 513 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Zic5Q7TQ40 622 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 P2ry10Q8BFU7 328 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Ccdc87Q8CDL9 855 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Ago4Q8CJF8 861 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 TxlnbQ8VBT1 685 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Slc35f6Q8VE96 372 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Luc7lQ9CYI4 371 aaKnown RBP17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 4921524L21RikQ9D5T2 438 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Gfpt2Q9Z2Z9 682 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Kiaa1522A2A7S8 1013 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Zfp213E9QAW0 468 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Ncf2O70145 525 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Xrcc6P23475 608 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Epb41l4aP52963 686 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Prr7Q3V0I2 269 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Cyfip2Q5SQX6 1253 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Insm1Q63ZV0 521 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Swap70Q6A028 585 aaKnown RBP17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Acat1Q8QZT1 424 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Lrrc42Q8R2U7 421 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Arhgef7Q9ES28 862 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 PigoQ9JJI6 1093 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Trappc11B2RXC1 1133 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Gm38392E9Q2A2 434 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 FosP01101 380 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Becn2P0DM65 447 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Mcm5P49718 733 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Nlrp4cQ3TKR3 982 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Tatdn3Q3U1C6 294 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Kiaa1211Q5PR69 1207 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Slc10a5Q5PT54 434 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Rsad1Q5SUV1 442 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Peg10Q7TN75 958 aaKnown RBP17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Gpr180Q8BPS4 441 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Dph5Q9CWQ0 281 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Fam111aQ9D2L9 613 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Prpf4Q9DAW6 521 aaKnown RBP17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Ifi202Q9R002 445 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Ttc6G3UYY4 1857 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Osbpl9A2A8Z1 736 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Dnajb6O54946 365 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 CnpP16330 420 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Rps6ka6Q7TPS0 764 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Srrm3Q80WV7 648 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 HhatQ8BMT9 499 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Anapc4Q91W96 807 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Pstpip2Q99M15 334 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Pramef12Q9D2F1 463 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Pabpc6Q9D4E6 643 aaKnown RBP17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Cmtm5Q9D6G9 156 aa17.85■□□□□ 0.45
Shh-201ENSMUST00000002708 Sned1Q70E20 1403 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Ttll10A4Q9F3 704 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Nmt1O70310 496 aaKnown RBP17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 VimP20152 466 aaKnown RBP17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Lmnb2P21619 596 aaKnown RBP17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Gm5935Q497S0 212 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Atp13a4Q5XF90 1193 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Brd2Q7JJ13 798 aaKnown RBP17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Tmc3Q7TQ69 1130 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Ccdc186Q8C9S4 917 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Dr1Q91WV0 176 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Atp6v0a4Q920R6 833 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Borcs6Q9D6W8 360 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Flt1P35969 1333 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Fam171a1A2ATK9 892 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Art2aP17981 287 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Hoxa11P31311 313 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 MagohP61327 146 aaKnown RBP17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Traf5P70191 558 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Dph1Q5NCQ5 438 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Six2Q62232 296 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 CgasQ8C6L5 507 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Slc12a6Q924N4 1150 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 MagohbQ9CQL1 146 aa17.84■□□□□ 0.45
Shh-201ENSMUST00000002708 Tex13c2A0A0G2JGA3 530 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 Gm382B1AXN3 1250 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 Rad51bO35719 350 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 Mmp14P53690 582 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 Atp8a1P70704 1164 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 Sox13Q04891 613 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 Tex11Q14AT2 947 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 Ice2Q3UZ18 988 aaKnown RBP17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 Krt31Q61765 416 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 Zdhhc24Q6IR37 284 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 3830417A13RikQ8BQJ2 303 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 Trim47Q8C0E3 641 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 Plcg2Q8CIH5 1265 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 P3h4Q8K2B0 443 aa17.83■□□□□ 0.45
Shh-201ENSMUST00000002708 Usp31E9Q6Y8 1344 aa17.83■□□□□ 0.44
Shh-201ENSMUST00000002708 Senp1P59110 640 aa17.83■□□□□ 0.44
Shh-201ENSMUST00000002708 Tbx22Q8K402 517 aa17.83■□□□□ 0.44
Shh-201ENSMUST00000002708 Bst2Q8R2Q8 172 aa17.83■□□□□ 0.44
Shh-201ENSMUST00000002708 Pcdha5Q91Y15 934 aa17.83■□□□□ 0.44
Shh-201ENSMUST00000002708 Dph6Q9CQ28 267 aa17.83■□□□□ 0.44
Shh-201ENSMUST00000002708 Fam133bQ9CVI2 245 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 118.4 ms