RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 YOL163WP0CF20 169 aa-2.43□□□□□ -2.8
snR40snR40 GPA2P10823 449 aa-2.43□□□□□ -2.8
snR40snR40 MDH2P22133 377 aa-2.43□□□□□ -2.8
snR40snR40 CLB1P24868 471 aa-2.43□□□□□ -2.8
snR40snR40 LDS1P31379 325 aa-2.43□□□□□ -2.8
snR40snR40 YDR089WP38966 869 aa-2.43□□□□□ -2.8
snR40snR40 SLZ1P40167 298 aa-2.43□□□□□ -2.8
snR40snR40 IST3P40565 148 aaPredicted RBP-2.43□□□□□ -2.8
snR40snR40 AAH1P53909 347 aa-2.43□□□□□ -2.8
snR40snR40 DAD3P69850 94 aa-2.43□□□□□ -2.8
snR40snR40 VPS38Q05919 439 aa-2.43□□□□□ -2.8
snR40snR40 SRL2Q12020 392 aa-2.43□□□□□ -2.8
snR40snR40 RIP1P08067 215 aa-2.44□□□□□ -2.8
snR40snR40 DSF1P0CX08 502 aa-2.44□□□□□ -2.8
snR40snR40 YNR073CP0CX09 502 aa-2.44□□□□□ -2.8
snR40snR40 GAL3P13045 520 aa-2.44□□□□□ -2.8
snR40snR40 CDC42P19073 191 aa-2.44□□□□□ -2.8
snR40snR40 CLN1P20437 546 aa-2.44□□□□□ -2.8
snR40snR40 EXG1P23776 448 aaKnown RBP-2.44□□□□□ -2.8
snR40snR40 FZF1P32805 299 aa-2.44□□□□□ -2.8
snR40snR40 IST2P38250 946 aa-2.44□□□□□ -2.8
snR40snR40 CCT2P39076 527 aaKnown RBP-2.44□□□□□ -2.8
snR40snR40 LCB2P40970 561 aa-2.44□□□□□ -2.8
snR40snR40 RMD8P43620 662 aa-2.44□□□□□ -2.8
snR40snR40 SVL3Q03088 825 aaKnown RBP-2.44□□□□□ -2.8
snR40snR40 PRR2Q12310 699 aa-2.44□□□□□ -2.8
snR40snR40 HMS1Q12398 434 aa-2.44□□□□□ -2.8
snR40snR40 MRPL23Q12487 163 aaPredicted RBP-2.44□□□□□ -2.8
snR40snR40 RAD7P06779 565 aa-2.45□□□□□ -2.8
snR40snR40 CAP2P13517 287 aa-2.45□□□□□ -2.8
snR40snR40 GYP6P32806 458 aa-2.45□□□□□ -2.8
snR40snR40 RRG9P40156 214 aa-2.45□□□□□ -2.8
snR40snR40 REX2P54964 269 aaKnown RBP-2.45□□□□□ -2.8
snR40snR40 NNT1Q05874 261 aa-2.45□□□□□ -2.8
snR40snR40 MRX9Q07349 420 aaKnown RBP-2.45□□□□□ -2.8
snR40snR40 YAL063C-AQ3E791 96 aa-2.45□□□□□ -2.8
snR40snR40 NOP14Q99207 810 aaKnown RBP-2.45□□□□□ -2.8
snR40snR40 CBP2P03874 630 aaPredicted RBP-2.46□□□□□ -2.8
snR40snR40 TPK1P06244 397 aa-2.46□□□□□ -2.8
snR40snR40 CTR86P25355 563 aa-2.46□□□□□ -2.8
snR40snR40 PBN1P25580 416 aa-2.46□□□□□ -2.8
snR40snR40 ZRT3P34240 503 aa-2.46□□□□□ -2.8
snR40snR40 COS9P36034 407 aa-2.46□□□□□ -2.8
snR40snR40 AVT2P39981 480 aa-2.46□□□□□ -2.8
snR40snR40 HSP31Q04432 237 aa-2.46□□□□□ -2.8
snR40snR40 FSH2Q05015 223 aa-2.46□□□□□ -2.8
snR40snR40 CTS2Q06350 511 aa-2.46□□□□□ -2.8
snR40snR40 ATP16Q12165 160 aa-2.46□□□□□ -2.8
snR40snR40 ATP10P18496 279 aa-2.47□□□□□ -2.8
snR40snR40 DDR48P18899 430 aaKnown RBP-2.47□□□□□ -2.8
snR40snR40 CHA1P25379 360 aaKnown RBP-2.47□□□□□ -2.8
snR40snR40 MXR2P25566 168 aa-2.47□□□□□ -2.8
snR40snR40 DBF20P32328 564 aa-2.47□□□□□ -2.8
snR40snR40 VTC1P40046 129 aaRIP-Chip data-2.47□□□□□ -2.8not detected
snR40snR40 SOK1P40317 901 aa-2.47□□□□□ -2.8
snR40snR40 YIL054WP40524 105 aa-2.47□□□□□ -2.8
snR40snR40 MIC19P43594 170 aa-2.47□□□□□ -2.8
snR40snR40 PHB2P50085 310 aa-2.47□□□□□ -2.8
snR40snR40 YIF1P53845 314 aaKnown RBP-2.47□□□□□ -2.8
snR40snR40 LUC7Q07508 261 aaPredicted RBP-2.47□□□□□ -2.8
snR40snR40 REX4Q08237 289 aa-2.47□□□□□ -2.8
snR40snR40 MMT2Q08970 484 aa-2.47□□□□□ -2.8
snR40snR40 YPL272CQ08984 517 aa-2.47□□□□□ -2.8
snR40snR40 SGS1P35187 1447 aa-2.48□□□□□ -2.81
snR40snR40 ARD1P07347 238 aaPredicted RBP-2.48□□□□□ -2.81
snR40snR40 CLB4P24871 460 aa-2.48□□□□□ -2.81
snR40snR40 ITR2P30606 609 aa-2.48□□□□□ -2.81
snR40snR40 SPO23P33757 523 aa-2.48□□□□□ -2.81
snR40snR40 THI2P38141 450 aa-2.48□□□□□ -2.81
snR40snR40 ECM8P38246 354 aa-2.48□□□□□ -2.81
snR40snR40 MMS4P38257 691 aa-2.48□□□□□ -2.81
snR40snR40 YHL026CP38740 315 aa-2.48□□□□□ -2.81
snR40snR40 YER076CP40049 302 aa-2.48□□□□□ -2.81
snR40snR40 COG3P40094 801 aa-2.48□□□□□ -2.81
snR40snR40 BMT5P40493 336 aa-2.48□□□□□ -2.81
snR40snR40 SAS2P40963 338 aa-2.48□□□□□ -2.81
snR40snR40 YJL118WP47022 219 aa-2.48□□□□□ -2.81
snR40snR40 COS5P47187 383 aa-2.48□□□□□ -2.81
snR40snR40 LYS4P49367 693 aaPredicted RBP-2.48□□□□□ -2.81
snR40snR40 IMD4P50094 524 aaKnown RBP-2.48□□□□□ -2.81
snR40snR40 MGA1P53050 456 aa-2.48□□□□□ -2.81
snR40snR40 CAB4P53332 305 aa-2.48□□□□□ -2.81
snR40snR40 PHM6Q05637 104 aa-2.48□□□□□ -2.81
snR40snR40 ADR1P07248 1323 aa-2.48□□□□□ -2.81
snR40snR40 FUM1P08417 488 aaKnown RBP-2.49□□□□□ -2.81
snR40snR40 PRP21P32524 280 aaPredicted RBP-2.49□□□□□ -2.81
snR40snR40 ALY1P36117 915 aa-2.49□□□□□ -2.81
snR40snR40 ZTA1P38230 334 aaKnown RBP-2.49□□□□□ -2.81
snR40snR40 ACA1P39970 489 aa-2.49□□□□□ -2.81
snR40snR40 LYS14P40971 790 aa-2.49□□□□□ -2.81
snR40snR40 BIO4P53630 237 aa-2.49□□□□□ -2.81
snR40snR40 ADH6Q04894 360 aaKnown RBP-2.49□□□□□ -2.81
snR40snR40 YLR278CQ05854 1341 aa-2.49□□□□□ -2.81
snR40snR40 NRP1P32770 719 aaKnown RBP RIP-Chip data-2.5□□□□□ -2.81not detected
snR40snR40 YBR056WP38081 501 aa-2.5□□□□□ -2.81
snR40snR40 EFM1P38732 585 aa-2.5□□□□□ -2.81
snR40snR40 YHR054CP38780 354 aa-2.5□□□□□ -2.81
snR40snR40 GPI16P38875 610 aa-2.5□□□□□ -2.81
snR40snR40 SPC72P39723 622 aa-2.5□□□□□ -2.81
snR40snR40 PUG1P40100 303 aa-2.5□□□□□ -2.81
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms