RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PWP1	YLR196W	RPL10	P41805	221 aa	Known RBP	4.99	□□□□□ -1.61
PWP1	YLR196W	DIM1	P41819	318 aa	Known RBP	4.99	□□□□□ -1.61
PWP1	YLR196W	PFA3	P42836	336 aa		4.99	□□□□□ -1.61
PWP1	YLR196W	ALK1	P43633	760 aa	Known RBP	4.99	□□□□□ -1.61
PWP1	YLR196W	PFD1	P46988	109 aa		4.99	□□□□□ -1.61
PWP1	YLR196W	RPA34	P47006	233 aa	Predicted RBP	4.99	□□□□□ -1.61
PWP1	YLR196W	ALT2	P52892	507 aa		4.99	□□□□□ -1.61
PWP1	YLR196W	PPT1	P53043	513 aa		4.99	□□□□□ -1.61
PWP1	YLR196W	NQM1	P53228	333 aa	Predicted RBP	4.99	□□□□□ -1.61
PWP1	YLR196W	DRN1	P53255	507 aa	Known RBP	4.99	□□□□□ -1.61
PWP1	YLR196W	PDR16	P53860	351 aa	Known RBP	4.99	□□□□□ -1.61
PWP1	YLR196W	SNP1	Q00916	300 aa	Predicted RBP	4.99	□□□□□ -1.61
PWP1	YLR196W	SHR3	Q02774	210 aa		4.99	□□□□□ -1.61
PWP1	YLR196W	EKI1	Q03764	534 aa		4.99	□□□□□ -1.61
PWP1	YLR196W	YDR444W	Q04093	687 aa		4.99	□□□□□ -1.61
PWP1	YLR196W	SLD7	Q08457	257 aa		4.99	□□□□□ -1.61
PWP1	YLR196W	HRT3	Q12347	344 aa		4.99	□□□□□ -1.61
PWP1	YLR196W	CDC7	P06243	507 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	HIS5	P07172	385 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	RPL3	P14126	387 aa	Known RBP	4.98	□□□□□ -1.61
PWP1	YLR196W	CKA1	P15790	372 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	IDP1	P21954	428 aa	Known RBP	4.98	□□□□□ -1.61
PWP1	YLR196W	DOA1	P36037	715 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	TCD2	P36101	447 aa	Known RBP	4.98	□□□□□ -1.61
PWP1	YLR196W	AVT5	P38176	459 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	IST2	P38250	946 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	YPT31	P38555	223 aa	Known RBP	4.98	□□□□□ -1.61
PWP1	YLR196W	MUP3	P38734	546 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	SAH1	P39954	449 aa	Known RBP	4.98	□□□□□ -1.61
PWP1	YLR196W	SSU1	P41930	458 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	SPT20	P50875	604 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	SGF73	P53165	657 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	YGR035C	P53222	116 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	PUS6	P53294	404 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	DYN2	Q02647	92 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	ELP4	Q02884	456 aa	Known RBP	4.98	□□□□□ -1.61
PWP1	YLR196W	TPP1	Q03796	238 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	CAC2	Q04199	468 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	YML096W	Q04489	525 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	YMR253C	Q04835	414 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	MFB1	Q04922	465 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	YDR222W	Q04925	415 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	COQ9	Q05779	260 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	CTS2	Q06350	511 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	FRQ1	Q06389	190 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	TDA5	Q06417	326 aa	Known RBP	4.98	□□□□□ -1.61
PWP1	YLR196W	IWR1	Q07532	353 aa	Predicted RBP	4.98	□□□□□ -1.61
PWP1	YLR196W	HRD1	Q08109	551 aa		4.98	□□□□□ -1.61
PWP1	YLR196W	GCR1	P07261	785 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	RPL27A	P0C2H6	136 aa	Known RBP	4.97	□□□□□ -1.61
PWP1	YLR196W	RPL27B	P0C2H7	136 aa	Known RBP	4.97	□□□□□ -1.61
PWP1	YLR196W	SPO7	P18410	259 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	PTC6	P25646	442 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	AFG1	P32317	509 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	AAR2	P32357	355 aa	Predicted RBP	4.97	□□□□□ -1.61
PWP1	YLR196W	ABD1	P32783	436 aa	Predicted RBP	4.97	□□□□□ -1.61
PWP1	YLR196W	PTM1	P32857	523 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	SKT5	P34226	696 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	MRPL4	P36517	319 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	TCM62	P38228	572 aa	Known RBP	4.97	□□□□□ -1.61
PWP1	YLR196W	AZR1	P50080	613 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	UBC12	P52491	188 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	COG7	P53195	279 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
PWP1	YLR196W	YNL010W	P53981	241 aa	Known RBP	4.97	□□□□□ -1.61
PWP1	YLR196W	CTL1	Q03220	320 aa	Known RBP	4.97	□□□□□ -1.61
PWP1	YLR196W	YDR391C	Q04170	232 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	CYK3	Q07533	885 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	YOR022C	Q12204	715 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	YLR361C-A	Q3E795	98 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	COR1	P07256	457 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	DDI2	P0CH63	225 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	DDI3	P0CH64	225 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	RAD18	P10862	487 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	PHO81	P17442	1178 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	SAR1	P20606	190 aa	Known RBP	4.97	□□□□□ -1.61
PWP1	YLR196W	YCK1	P23291	538 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	BEM1	P29366	551 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
PWP1	YLR196W	DTR1	P38125	572 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	EAF5	P39995	279 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	MGS1	P40151	587 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	HXT9	P40885	567 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	MRX5	P47007	382 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	YGR066C	P53242	292 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	YGR079W	P53249	370 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	OGG1	P53397	376 aa	Predicted RBP	4.97	□□□□□ -1.61
PWP1	YLR196W	ASI2	P53895	289 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	RPL22B	P56628	122 aa	Known RBP	4.97	□□□□□ -1.61
PWP1	YLR196W	NAN1	Q02931	896 aa	Known RBP	4.97	□□□□□ -1.61
PWP1	YLR196W	YMR210W	Q03649	449 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	MDM30	Q05930	598 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	SKG3	Q06315	1026 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	YLR040C	Q07988	224 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	YOR365C	Q08844	703 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	LEA1	Q08963	238 aa	Predicted RBP	4.97	□□□□□ -1.61
PWP1	YLR196W	THI21	Q08975	551 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	RAD59	Q12223	238 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	MOT1	P32333	1867 aa		4.97	□□□□□ -1.61
PWP1	YLR196W	FLO11	P08640	1367 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms